Shewanella livingstonensis: EGC82_10115
Help
Entry
EGC82_10115 CDS
T05875
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03030
DNA replication
slj03430
Mismatch repair
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGC82_10115
03430 Mismatch repair
EGC82_10115
03440 Homologous recombination
EGC82_10115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slj03032
]
EGC82_10115
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_10115
Enzymes [BR:
slj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGC82_10115
DNA replication proteins [BR:
slj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGC82_10115
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGC82_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZG73089
UniProt:
A0A3G8LU39
LinkDB
All DBs
Position
2338005..2338733
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISSASRQVILDTETTGMNQAGGPIYVGHRIIEIGCVEVINRRLTGRTYHQYINPGQA
IDEEAIQVHGITDDRVANEPRFHQIAKDFIDFIDGAEIVAHNANFDVSFMDHEFSKLNPI
GPKTKDFCTVLDSLAIAKRLHPGQKNNLDALCRRYGIDNGRRTYHGALLDAEILADVYLI
MTGGQIKFNLSNEKAGQEGGGIKKIDPAAFNLKVVGASADEILLHEQRLDLIAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatttctagtgcaagtcgtcaagtcattctcgataccgaaacaaccggtatg
aaccaagctggtggacccatttatgtgggtcatcggattattgaaattggttgtgttgaa
gtcattaatcgtcgtttaacaggccgaacatatcatcaatatattaatcctggtcaagcg
attgatgaagaagctattcaagttcacggtattaccgatgaccgcgttgctaatgagccg
cgctttcaccaaatagccaaagattttatcgattttattgatggcgccgaaattgtcgcg
cacaacgctaatttcgacgtgagctttatggatcatgagttttcaaagctcaatcctatt
ggtccaaaaactaaagatttttgtactgttttagacagtttggccattgccaaacgtctg
catccaggccaaaaaaacaatctagatgcattgtgtagacgttatggtatcgataatggt
cggcgtacttaccatggcgcattactcgatgcggaaattctcgctgatgtttatttaatc
atgaccggtggacaaattaagtttaatttgtccaatgaaaaagcgggtcaagaaggaggc
gggataaaaaaaatcgaccctgcggcgtttaatcttaaagtcgttggtgcatctgccgat
gaaatactattacacgaacaacgacttgacctcattgcgaagtcaggtaaatgtctctgg
agagggtaa
DBGET
integrated database retrieval system
