Shewanella livingstonensis: EGC82_10240
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Entry
EGC82_10240 CDS
T05875
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGC82_10240 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_10240 (ruvB)
Enzymes [BR:
slj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGC82_10240 (ruvB)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGC82_10240 (ruvB)
RecFOR pathway proteins
EGC82_10240 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
IstB_IS21
AAA_14
AAA_3
AAA_22
nSTAND3
Mg_chelatase
Rad17
NTPase_1
AAA_17
AAA_18
RNA_helicase
DUF815
NB-ARC
AAA_25
AAA_24
AAA_19
TsaE
ABC_tran
AAA_11
Sigma54_activ_2
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AZG73113
UniProt:
A0A3G8LTL4
LinkDB
All DBs
Position
2368488..2369498
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLIQPQVQGQDEQIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAINRREALDHMLI
FGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGIPLR
LEFYNVKDLTTIVIRSAKVMELEVDLQGAIEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
KVTQKVAEYALDLLDVDEEGFDYLDRKLLLAIIDKFMGGPVGLDNLAAAIGEDRETIEDV
LEPFLIQQGFIQRTPRGRIASQRAYDHFSLVKPEKV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgcctaatccagccacaagtacaaggtcaagatgaacagattgac
cgtgctatgcggcctaaaatgttggatgagtataccggccaagatgatactcgagctcag
cttaaggtgttcattcaagcagcgataaaccgtcgtgaagcccttgatcacatgttaatt
tttggtcccccaggtttaggtaaaacaaccttagcaatgattgttgccaatgaaatgggt
gtgaacataaagtccacttctgggcctgtacttgaaaaagccggtgacttagccgccttg
ttaaccaatcttgaagagggtgatgtactgtttatcgatgaaattcatcgtctaagccct
gtagttgaagagattctttatccggcaatggaagactaccaacttgatattatgattggt
gaaggtcctgctgcgcgttcgattaaattagatttaccgccatttacccttattggcgca
acaactcgcgcaggagcattgacatctccactgcgggctcgttttggtatcccattacgt
ttggaattttacaatgtcaaagatttgaccaccattgtgatccgctcagctaaggtgatg
gaacttgaggttgatctgcagggggcgattgaaattgccaaacgttcacgcggtacgccg
cgaattgccaaccgtttactgcgccgggttcgcgactatgctgaagttaaacatgacggt
aaagtgacccaaaaagtggctgaatatgcacttgatctactcgatgttgatgaggaaggc
tttgattatttagatcgtaaacttttgcttgccattattgataaatttatggggggacct
gtagggttagacaatcttgccgcagccattggtgaagacagagaaacgattgaggatgta
ttggagccttttttaatccagcaaggttttattcaacgtacacccagaggtcgaattgcc
tctcaaagagcttatgatcatttcagtttggttaaacctgaaaaagtgtaa
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