Shewanella livingstonensis: EGC82_10315
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Entry
EGC82_10315 CDS
T05875
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
slj
Shewanella livingstonensis
Pathway
slj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGC82_10315 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_10315 (uvrB)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGC82_10315 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGC82_10315 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA
Kinesin
AAA_22
Ish1
Motif
Other DBs
NCBI-ProteinID:
AZG73122
UniProt:
A0A3G8LW48
LinkDB
All DBs
Position
2381408..2383429
Genome browser
AA seq
673 aa
AA seq
DB search
MSESVFSLESKFEPAGDQPTAIKKLVDGLEAGVASQTLLGVTGSGKTYTIANVIKQMGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDFMGQRDILIRLSEL
QYKRNDIELQRGTYRVRGEVIDIFPAESEREAIRIELFDDEIERLSEFDPLTGQINKRIA
RTTIYPKTHYVTPREKIVAATEDIKQELRERRQYLLDNNKLIEAQRITERVQYDIEMMVE
LGYCSGIENYSRYLSGRSPGDGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKM
NLVEYGFRLPSALDNRPLMFEEFERLMPQTIFVSATPSLYELEKSTGEIAEQVVRPTGLL
DPVLEVRPVGIQVDDLLSEIHKRVAVNERVLVTTLTKRMSEDLSEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGRFDVLIGINLLREGLDLPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAMDETERRREKQHLHNIANGIVPRGVVKSITDVMDI
GDTNFSKGTRKNHSKFAEVAEERAKYTSIADLSHQIDKLEKQMHEHAKNLEFEQAAAVRD
DVKHLRDLIIVNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagtcagtattttccctagagtccaaatttgaacccgccggcgatcaacctaca
gcgataaaaaaattagttgatggtttagaagctggtgtagcgagccaaacattattgggt
gtgacgggatccggtaaaacatacaccatagcgaatgtgattaagcaaatgggccggccg
accatcatcatggcgcctaacaaaacccttgcggcgcaactttacggtgaaatgaaagag
tttttcccgcacaacgcggttgaatactttgtttcttactatgattactatcaaccagaa
gcgtatgtacccgcgtctaacacctttatagaaaaagatgcatcagtcaatgctcacatt
gagcaaatgcgtttatcggccactaaggcgctattagaacgtaaagatgtggtactcatt
gcctcagtatcggctatatatggtttgggtgaccccgattcatatatgaaaatgttactg
catttgcgccaaggtgattttatggggcaacgtgatattctcattcgactcagtgaactg
caatacaaacgtaatgatattgaattacaacgtggaacatatcgagttcgcggtgaagtg
atcgatatttttccggcagaatcagaacgcgaagccattcgaattgaattatttgatgat
gaaattgaacgcttaagcgaatttgatccattaactggacagattaacaagcggattgcg
cgtaccactatttatccgaaaacccattatgtgacgccccgagaaaaaattgttgctgca
actgaagatattaaacaagaactgcgcgaacgtcgccaatatttactcgacaacaacaaa
ttgattgaagctcagcggatcaccgagcgggtacaatacgacattgaaatgatggtcgag
ttaggctattgctcaggaatcgaaaattattcacgatatttatccggtcgatcacctgga
gatggtccaccaacactattagattatttacctgcggatggtttactgattattgatgag
tcacacgtgacggtgccgcaaattggtgctatgtacaaaggtgatagaagtcgaaaaatg
aatttagtcgagtatggttttcgattgccatcagcattagacaatcgtccattgatgttt
gaagaatttgagcggttaatgccgcaaactatttttgtgtcggctacgcccagtttatat
gaacttgaaaaaagcactggcgagatagcagagcaggtggtgagaccaactggactactc
gaccctgtacttgaagttcgcccggttggtattcaagttgacgatttgttgtctgagatc
cacaaacgcgtggcggtgaatgaaagggtactcgtgaccactttaactaagcggatgtca
gaagacctcagtgagtatcttgacgaacatggcgtcaaggttcgttatctgcattctgat
attgataccgtggagcgagttgaaattattcgtgatttacgattaggacgttttgacgta
ctgattgggattaacttattgcgtgaaggtcttgatttacctgaagtgtcattagtgtgt
attttagatgccgataaagagggctttttacgttccgagcgttcacttattcagaccata
ggtcgcgcagctcgtaatgttaacggtaaagttattttgtatgccgatcgcataacaaac
tctatggctaaagccatggatgaaactgagcgccgacgagaaaagcagcacttgcacaat
attgctaatggcattgtgccccgcggagttgtaaaaagtattaccgatgtgatggatatt
ggtgatactaacttcagtaaagggacgcgtaaaaatcactctaaatttgctgaagtagcc
gaagaacgtgctaaatacaccagtattgccgatttgagtcatcaaattgataaactggag
aagcaaatgcacgaacatgctaaaaacttagagtttgagcaagctgcagcggtgcgggat
gatgttaaacatttacgcgatctgattattgttaacagctaa
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