Shewanella livingstonensis: EGC82_13485
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Entry
EGC82_13485 CDS
T05875
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
slj
Shewanella livingstonensis
Pathway
slj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EGC82_13485 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slj02000
]
EGC82_13485 (msbA)
Enzymes [BR:
slj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EGC82_13485 (msbA)
Transporters [BR:
slj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EGC82_13485 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
DEAD
RsgA_GTPase
ABC_ATPase
nSTAND3
PRK
AAA_23
acVLRF1
G-alpha
YobI-ATPase
STT3_PglB_C
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AZG73684
UniProt:
A0A3G8LWA8
LinkDB
All DBs
Position
complement(3123543..3125345)
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AA seq
600 aa
AA seq
DB search
MSASPKNEMWVVFKRLMAYVVPMKAMFIMAVLGLITYGAVDAAFIAFIKPFIDEGFSQTP
TIVAGVDLPTHGGFNANNDIMLMAPIAVILMFSLRGVANFVSTYCVSYMSAQLIMDMRQQ
VFEHYLRLPVSYIDRENSGNLISRVTFDTEQIARASGSALISIVRDSMTAIGMLGIMFYY
SWKLSLCILVIGPIMGVVISVVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLVFGGQ
KTEVDRFYQVNDQNRYQNMKLAVAQSISQPLIMVIGSFALAFVLYAATWDSMKTDLTAGT
FAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTPPEPDNGPFSIDRVQGKLR
FENVTFTYPGQDKPALNGIDFEVKPGKTIALVGRSGSGKSTIASLITRFYGGLSTGDISL
DDTSIYDYQLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIVRAAELAYAMEF
IDTLPKGLDTQIGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQKG
LDNLRHNRTSIVIAHRLSTIESADEILVIDQGRVVERGNHTDLIAQEGIYANLYLMQFSQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcacctaaaaatgaaatgtgggtcgttttcaaacgtttgatggcctatgtc
gtacctatgaaggccatgtttattatggctgttcttggtcttatcacctatggcgctgtc
gatgcagcgtttatcgcgtttattaaaccttttattgatgaaggctttagtcaaactcca
acgatagttgccggtgtcgatttaccgactcatggtgggtttaacgccaataatgacatt
atgttaatggcgcctatcgctgttattctaatgttcagtttgcgtggcgtggccaacttt
gtgtcgacttattgtgtgtcgtacatgagtgctcagctcatcatggatatgcgtcaacaa
gtgtttgagcattatctgcgtttgccggtgagttatatcgaccgcgaaaatagtggtaat
ttaatttcacgtgtcacctttgacactgaacaaattgctcgagcatccggtagcgcgtta
atttcaattgtccgtgacagcatgaccgccatcggcatgttaggcattatgttttactac
tcatggaaattgtcattatgcatcttggtgataggcccaattatgggtgtcgttatcagt
gttgtcagtaagcgttttcgtaaggtgtcgaagcaaattcaatctgctatgggcggcgta
accgcaacgactgagcagatgattaagggccataaaaacgttttagtgtttggcggccaa
aaaacagaagttgatcgtttttatcaagttaacgaccaaaaccgttatcaaaatatgaag
cttgcagtggcgcagtcaatcagtcagccacttattatggtgattggctctttcgcattg
gcgtttgtgttgtatgcagccacttgggatagcatgaaaacggatttaactgcaggtacg
tttgcagctattttaggtgccatgttagcaatgctacaaccgattaagaatttaactcgt
gttaatgcagagtttcaacgcggtattgctgcttgtaccacagtatttgaattattagat
actccacctgagccagataatggtccgtttagcattgatcgcgttcaaggtaaattaagg
tttgaaaatgttacctttacttatcctggacaagacaagcctgctttaaacggcattgat
tttgaagttaaaccaggtaaaactattgcattagtcggacggtcaggctctggtaagtca
actatcgccagtttaattacccgcttttacggcggattatcgaccggagatattagcctt
gatgacaccagtatttatgattaccagttaaaatcactacgtaatcaagtcgcgttagtg
tcgcagcaagtgaccttatttaacgacaccattgccaataatattgcctatgcttatccc
ggcgaagtgacacgcgaacaaattgttcgtgctgccgaactggcttatgccatggaattt
attgataccttgccaaaaggattagacacccaaataggcgagaatggcgtattgctttct
ggtggtcaacgtcaacgtattgccattgctcgagcgatgttacgtgatgctccggtgtta
attttagatgaagccacatctgccctagatactgagtctgaaaaagcgattcaaaaaggc
ctagataatttgcgccataaccgtacttctattgtcatcgcacatcggttgtctaccatt
gaaagtgcagatgaaattttggttattgatcaaggtcgggttgttgagcgtggtaatcac
actgacttaattgctcaagagggtatttacgccaatctttacctgatgcagtttagccaa
taa
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