Shewanella livingstonensis: EGC82_14335
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Entry
EGC82_14335 CDS
T05875
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slj03016
]
EGC82_14335 (truA)
Enzymes [BR:
slj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EGC82_14335 (truA)
Transfer RNA biogenesis [BR:
slj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGC82_14335 (truA)
Prokaryotic type
EGC82_14335 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AZG73830
UniProt:
A0A3G8LYK4
LinkDB
All DBs
Position
complement(3313444..3314229)
Genome browser
AA seq
261 aa
AA seq
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MRVALGVEYDGSGFCGWQRQLDVDSVQAQVEKALSYVANEPIKVLCAGRTDTGVHGTGQV
VHFDTNVQRPVSAWTQGVNANLPDSIAIRWAKEVDDTFHARYSAMARRYRYVIYNYKLRP
GILGAGVSHYHGDIDETLMHQAAQLFVGEHDFTTFRALHCQAKTPFRTVHQVNVTRQGMY
VMVDIQANAFLHHMVRNIVGSLLQIGLGNQPIEWITELLALKNRKLAAATAKPNGLYLVD
VTYPEQYQLPKLSLGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcgcgttaggtgttgaatatgatggtagtggtttttgtggatggcagcgccaa
ctcgatgtcgattcagtgcaagcccaggttgaaaaagccttaagttatgtggctaacgag
cctataaaagtattatgtgctggacgaaccgatacaggtgttcacggtacagggcaagta
gtgcattttgacaccaatgttcaacggccagtgtcggcatggactcaaggtgttaatgct
aacttgcctgacagcatagctattcgatgggcaaaagaggtcgatgacacttttcacgct
cgttatagtgccatggccagacgctatcgctatgtgatttataattataaattgcgcccg
ggtattttaggtgcaggcgtgagccattatcacggtgatattgatgaaaccttaatgcat
caagccgcgcagcttttcgtcggcgaacacgattttaccacatttagagcgttgcattgc
caagctaaaacaccgtttcgaactgtgcatcaagtgaatgttacacgccaaggtatgtat
gtgatggtggacattcaagctaatgcttttttacatcatatggtgcgtaatattgtcggt
tctttgctgcaaatcggtttaggtaatcagcctatcgagtggataacagagcttttagca
ttgaaaaatcgcaagttagcggctgcaacggctaaaccgaacggattgtatttggttgat
gtgacttaccctgagcaatatcaattgcctaagttatcccttgggcctttgtttatgctt
gattaa
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