Shewanella livingstonensis: EGC82_16815
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Entry
EGC82_16815 CDS
T05875
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
slj
Shewanella livingstonensis
Pathway
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGC82_16815 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_16815 (recO)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EGC82_16815 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EGC82_16815 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AZG74265
UniProt:
A0A3G8LYU1
LinkDB
All DBs
Position
complement(3884465..3885187)
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AA seq
240 aa
AA seq
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MATMKRGYVLHHRQFRESSVIVNLLIEGVGRVDAITRVGSGKRSIKSILQPFQPLIIQFS
AKSEAKNLGLKNITQIESAAPAMPLSANSLYSGFYLNELLVRLLSVEHQAEGLFLDYHRA
LLALAKQFCSSHLRYFEMALLLELGAFPSLAYDTQGDLLDSGCHYRFIADGGFIPVATNQ
DPSFTHGKGCLSGSMLLALAAQNLQPEQFNQAKGLMRYLLTPLLGNKPLLSRLLFTKKAD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccactatgaaacgtggctatgtgcttcatcatcgacaatttcgcgaatcgagcgtg
attgtaaatttgctaatagagggcgttgggcgtgttgatgccattacccgagtcggttca
ggtaaacgttctattaaaagtatcttacaaccttttcaacctcttattatccaatttagt
gccaaatcggaagcaaaaaatctagggttaaaaaatattactcagattgaatctgctgcg
ccagcgatgccactaagcgcgaatagtctttattcaggtttttatttaaacgagttattg
gttcgtctattatcagttgaacaccaagccgaaggactctttttagactatcaccgtgcg
ttactcgcactagctaaacagttttgctcaagtcatctgcgttatttcgaaatggcactg
ttattagagttaggtgcatttccatcgcttgcttatgatactcaaggtgatttacttgac
agcggttgtcattatcgctttattgctgatggtggttttattcctgtggcaactaatcaa
gatccctcttttactcatggtaaaggctgtttatctggctcaatgttgctcgcattggca
gcgcaaaacttacaaccggaacagtttaaccaagccaaaggattaatgcgttatttgcta
acgccattactgggtaataaaccgttgttaagtcggctgttatttaccaaaaaagcagat
tag
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