Shewanella livingstonensis: EGC82_17355
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Entry
EGC82_17355 CDS
T05875
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_17355
Enzymes [BR:
slj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EGC82_17355
DNA repair and recombination proteins [BR:
slj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EGC82_17355
Prokaryotic type
EGC82_17355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Sulfotransfer_5
Motif
Other DBs
NCBI-ProteinID:
AZG74363
UniProt:
A0A3G8LXA1
LinkDB
All DBs
Position
complement(4005581..4007023)
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AA seq
480 aa
AA seq
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MTSMNSLMWFRQDLRVADNPALVAACQFALQHQGKVRAVYIVTPSQWMRHDVAPIQIDFI
QRHVNLLAQSLAALGIPLDVLHLEWFSDTHAALKDYLQQHHIDAVFAGSEPEINERSRDN
ELIDQGIPLTLVDQDCVLAAGKVQNLSGDMYKVFTPFSKKWKSIASQKAIVPLAVPAPVA
AALTLPSTIEFNYQTRSSEQWAAGEGAAKRALEQFLASQVADYQADRDFPALEGTSRLSP
FLAIGVVSSRQCVAAILARYPEALVDDTCAAKTWLNELIWREFYRHLLVAFPRLSMAQNF
NELGKGIAWRNNSDEFTAWCDGQTGYPIIDAAMRQLNQTGWMHNRLRMVVASFLTKHLLV
DWRWGERYFRQQLIDGDLAANNGGWQWSAGTGCDAQPYFRVFNPMTQSSKFDPDASFIKR
YVPELARWSLKDIHEPKTVNVNDLFAQRQGDGYPQPIVEHKMARLRAIEVLSALKRGQPS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatgaatagcttgatgtggtttaggcaagatttacgggttgctgataaccca
gcattggtggcagcgtgtcaatttgccctgcaacatcaaggcaaggttagggctgtgtat
attgtgacaccgtcgcaatggatgcggcatgatgtggcaccgatacaaattgattttatt
caacggcatgtcaatctattagcacagtcacttgccgcattgggcataccattagatgta
ctgcatcttgagtggtttagcgacactcatgcagcgttaaaagattatctgcagcagcat
catatcgatgctgtatttgctggtagcgagcctgaaattaacgaacgcagccgcgataat
gagttaattgaccaggggataccactgacgttggttgatcaagattgtgtgttagctgcc
gggaaagtgcaaaatttatcgggtgacatgtataaggtatttaccccattttctaaaaag
tggaaaagcattgcgagtcaaaaagccattgtaccgttagcggtacctgctcctgttgca
gcggcattaacattgccttcaactatcgaatttaactatcaaactcgtagtagcgaacaa
tgggctgcaggcgagggcgcagccaagcgagcactcgaacaatttttagcaagccaagtt
gccgattaccaagccgatagagattttccggcgcttgaaggtactagccgcttatcgcct
tttttagccatcggagtcgttagttctcgccaatgtgttgcggcaatattagcccgttac
cctgaagcgttagttgatgatacttgtgctgcaaaaacctggttaaatgaactcatttgg
cgtgaattttatcggcatctgctggtggcatttccacgtttatcgatggcgcaaaacttt
aatgagttaggtaaaggtattgcttggcgtaacaattcagatgaatttactgcttggtgc
gatggacaaacaggctatccgattattgatgctgcaatgcgccaattaaatcaaactggc
tggatgcataatcgattacgcatggtagttgctagtttcttaaccaaacatttattagta
gattggcgctggggtgaacgttactttagacagcaattgattgacggcgatttagccgct
aataatggtggttggcaatggtctgcaggtacaggatgtgatgcacaaccttactttaga
gtgtttaatccgatgactcaaagcagtaagtttgatcccgatgctagctttattaaacgt
tatgttccagagcttgcccgttggtcgttaaaagacatacacgagcctaaaacggttaac
gttaatgatttatttgcccaacgacaaggcgatggctatccacaacctattgttgaacac
aagatggctcgtcttcgagcgatagaagtgttaagtgcactaaaacgaggtcaacctagt
tga
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