Shewanella livingstonensis: EGC82_17870
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Entry
EGC82_17870 CDS
T05875
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00550
Peptidoglycan biosynthesis
slj01100
Metabolic pathways
slj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EGC82_17870 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGC82_17870 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slj01011
]
EGC82_17870 (mrdA)
Enzymes [BR:
slj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EGC82_17870 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
slj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EGC82_17870 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF3537
Motif
Other DBs
NCBI-ProteinID:
AZG74451
UniProt:
A0A3G8LXV1
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Position
4108462..4110318
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AA seq
618 aa
AA seq
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MSPKKRITMHDHAAEAALFKRRAFFTFVCVFLLLCILFSNLYHLQVVSYKDYETRSNDNR
IRVVPTPPSRGLIYDRHGVLLAENQPYYSLELIPEKVEDITATLDELNTFIELSEDDREN
ITETLKFHRRFKPLTIKSKLTDEQVAIFSVNQYKFPGIYVEAGLKRHYPYNALLTHVLGY
VGKINTRDKALLEKSSQWKNYAATKDIGKQGIEKFYESLLHGIPGHLEEEVNNRGRVIRT
LKVTPPTPGQDIYLTLDLKLQQKAMELLDGRKGSVVAIDPRDGGVLAMISSPSYDPNPFV
HGISSKAYNDLLNDKSRPLINRATQGQYSPASTIKPHVALLGLEEKIISERTRIWDPGYW
QMPGVDRKWGDWKKWGHGWVDIYHAIVESCDIFFYDLVYKVGIDKMAIFMERFGFGKSTG
IDIFEESDGVMPSRDWKRMRYNQPWYNGDTISVGIGQGYWTTTPLQLANAVTIMANKGKR
FTPHLLKSFKNSTVKIDSPIDEQLPIELKDPRNWDIINEAMRQTADKSHFTDASYTAAMK
TGTAQVFSVGKDQKYNADTIADHLRDNALVVAYAPYENPRIVLAVVLENAGWGGKNAGPV
ARALLDEYMLRDKWAVKP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcgcattaccatgcatgatcacgccgcagaggccgcgctatttaaa
cgccgtgcattcttcactttcgtttgtgtattcttattactctgcatattattttcaaat
ctttatcatctgcaagttgtctcttacaaagactatgaaactcgttcaaatgataaccgt
atccgtgtggttccaactccgccgagtagagggttgatttatgaccgccatggtgtgcta
ttagccgaaaaccaaccttattattctttagaacttattccagagaaagtcgaggatatt
actgccaccttagatgagcttaatacctttattgaactctcagaagatgatcgtgaaaac
attactgaaacgctcaagtttcaccgtcgttttaagccgttaacgatcaagagcaaatta
accgacgaacaagtcgctatttttagtgttaatcaatataaatttcccggcatttacgtt
gaagcaggccttaagcgtcattatccttataacgcattactgacccatgtgcttggctat
gttggcaagattaatacccgcgataaagcattgcttgaaaaaagcagccagtggaaaaac
tatgctgcaaccaaagatattggtaagcagggtattgaaaaattttatgaaagtttgctt
catggtattccaggccacctcgaagaagaagtgaataaccgtggccgagtgatccgtacc
ctcaaagttaccccgccgacaccgggacaagatatctatctaacactcgatctcaaacta
cagcaaaaagccatggaactgttagatggccgtaaaggatctgttgtggcaatagacccc
agagatggtggtgttttagcgatgatatcgagcccatcatatgaccctaacccatttgta
catggtatttcttctaaagcctataatgacctgttaaatgataaatcgagaccattaatt
aaccgcgcaacccaaggacaatactctccggcgtcaaccataaagccgcatgttgcctta
ctgggtttggaagagaaaatcattagcgaacgcacgcgtatttgggatcctggctattgg
caaatgcccggtgttgatcgtaaatggggtgactggaaaaaatggggccatggctgggta
gatatctaccatgccattgttgagtcctgtgatattttcttttatgacctagtctacaaa
gttggtattgataaaatggcgatatttatggagcgctttggctttggcaaaagtactggt
attgatattttcgaagagtctgatggggtgatgccatcccgagactggaaaagaatgcga
tataatcagccttggtataacggcgataccatttcggtgggtattggccaaggctattgg
actacgaccccattacagcttgctaatgcggtgacaattatggccaataaaggcaaacga
tttacacctcatctattaaaatcatttaaaaatagtactgttaaaattgattctcctatt
gatgagcagttgccaatagaacttaaagatccgcgtaattgggacatcattaatgaggca
atgcgtcaaaccgccgataaatcgcactttactgatgctagttataccgccgcaatgaaa
acaggtactgcacaggtatttagtgtcggcaaagatcaaaagtataatgccgacaccata
gcagatcacctgcgcgataatgcactcgtggttgcttatgcaccctatgaaaatcctcgt
attgttttagcagtggtacttgaaaatgcgggttggggcggcaaaaatgccggcccggtc
gcaagagcattgctcgatgagtatatgttacgcgacaaatgggcggtaaaaccgtga
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