Shewanella livingstonensis: EGC82_18280
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Entry
EGC82_18280 CDS
T05875
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slj03036
]
EGC82_18280 (xerD)
Chromosome and associated proteins [BR:
slj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EGC82_18280 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
DUF3435
Motif
Other DBs
NCBI-ProteinID:
AZG74520
UniProt:
A0A3G8M0F6
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All DBs
Position
complement(4208096..4209013)
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AA seq
305 aa
AA seq
DB search
MDNALAKPAYQPDPLINQFVDDLWSINGLSDNTLVSYRTDLQSLDRYLSAKGHNLLQVDQ
AGLRDYLAERFDKNFAKSSTARLLSSLRRFYAYLVVKQKVSQDPTALIKSPKLARQLPDT
LSEAQIDSLLSEPNIDEPIEHRDKAMLELLYATGLRVTELVSLTMEQISLRQGLVRIMGK
GGKERLVPLGELAITAVEQYIKFARGELLSMKQSDVLFPSRRGQMMTRQTFWHRIKLYAA
RAGIVCHISPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKVRLQQLHSQ
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggataatgctttggccaaacctgcttatcaaccagatccattaattaaccagtttgtt
gacgatttatggtcaatcaacgggttaagtgataatactttggtatcctatcgtactgat
ctacaaagtttagatcgctacctttcggccaaaggccataatttacttcaagtagaccaa
gctgggctgcgtgactaccttgccgaacgtttcgataaaaactttgctaaaagtagtacc
gctagattactcagtagtttgcgacgcttttatgcttacttagtggttaagcagaaagtg
agccaagatcccaccgcgttaattaagtctccaaaactcgctcgccaattacccgatacc
ctatcggaggcccaaattgatagtttattgtcagagcctaatatcgatgagccaattgag
catcgcgataaagcgatgttggagctcttgtatgcaaccggcttacgagtaaccgaatta
gtcagtttaacgatggagcaaattagtttgcgccaaggtctggttaggattatgggcaaa
ggcggtaaagagcgtttggttcctttaggtgaactggccattacagcagtagagcagtac
attaagtttgctcgaggtgagttattgagtatgaagcaatccgatgtgttgtttccatca
cgtcgtgggcaaatgatgactagacaaactttttggcatcgaattaaattgtatgctgca
agggcagggattgtgtgtcatatatcgccacatacactccgacacgcctttgcgactcac
ttattgaaccacggagctgacctacgagtagtacaacttttattaggacatagtgattta
tctaccacgcaaatatatactcatgtagctaaagtgcgtttgcagcaattgcatagccag
catcatccgcgcggttga
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