Shewanella livingstonensis: EGC82_19295
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Entry
EGC82_19295 CDS
T05875
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03420
Nucleotide excision repair
slj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGC82_19295
03430 Mismatch repair
EGC82_19295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_19295
Enzymes [BR:
slj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGC82_19295
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGC82_19295
MMR (mismatch excision repair)
Other MMR factors
EGC82_19295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZG74709
UniProt:
A0A3G8LYE4
LinkDB
All DBs
Position
complement(4426914..4429103)
Genome browser
AA seq
729 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPLSNMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVVGTNMGRMWIGTFHGLAHRLLRTHYQDANLPQSFQIIDSDDQL
RLLKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGSFPIEQNLLNIYKIYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFRHILVDEFQDTNAIQYAWIRVLAGKT
ANVMIVGDDDQSIYGWRGAQIENLHRFLKDFDGAKTIRLEQNYRSTANILNASNAVISNN
PDRLGKELWTEDKDGEPISVYCAFNETDEAKFIVGRISDWQEKGGSLSECAILYRSNAQS
RVLEEAFLHKGLAYRIYGGLRFFERQEIKDAMGYMRLINNKDDDAAFERVVNTPARGIGD
RTLDIVRTTARQHQLTLWQACVHLIEEKVLAGRAANAINGFMELIISMRTDTADMLLYRM
ADSVIDRSGLRTMYEAEKGEKAQARIENLNELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGLFPSKMALDEGDRLDEERRLCY
VGMTRAMQKLYISYAESRRIYGREDYASPSRFINEIPEKFVEQIRIRAQVTPSVSKRFPA
RAAAVVVTKKPHGFNDTGHKVGSKVKHFKFGEGVVTSFEGSGEKGRVQVNFVDFGSKWLL
VSLAKLERC
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcatcattattagacggcctaaacgataagcagcgtgaggcagtcggcgcg
ccactttcaaatatgttggtgttagcgggtgccggcagtggtaaaacccgtgtattaact
catcgtattgcgtggttaatgcaagttgaacaacaaagtccatattctattttggcagtt
actttcaccaataaagccgcagcagaaatgcgcgagcgggtggaaaaagtcgtgggcact
aacatggggcggatgtggataggcactttccacggtttagctcatcgcttattacgtacc
cactatcaagatgccaatttaccgcaaagcttccagattatcgattctgacgatcagttg
cgtttgttaaaacgtattcttaaaagccttaacctagatgagaaacagtatcctcctcgt
caagctcagggttatatcaacggtaaaaaagaccaaggcttacgccctaagcatattgat
gcgggcagtttcccgattgagcaaaacttactcaatatttacaaaatttaccaagagtct
tgcgatcgtgcagggttggtcgattttgctgaaattctcttacgtgcacatgagttatgg
ttaaataaaccgcatttactggcgcattatcaagagcgttttcgtcatattttagtcgat
gagtttcaagatactaacgcaattcaatatgcttggatccgtgtgttagccggcaagaca
gctaatgtgatgattgtgggcgatgacgaccaatcaatttatggttggcgtggcgcgcaa
attgaaaacctccatcgtttcttaaaagactttgatggtgctaagaccattcgtttagag
cagaattaccgttcaacggcgaatattttgaatgcctctaatgctgtgatttctaataac
ccagatcgcttgggcaaagaattatggactgaagacaaagatggcgaacctatctctgtc
tattgcgcctttaatgagacggacgaggccaagtttattgtgggtcgcattagcgattgg
caagaaaaaggcggtagtttgagcgagtgcgcgattttatatcgttcaaatgcgcaatcg
cgagtattagaagaagcctttttacacaaagggttggcgtaccgtatttacggtggtttg
cgcttctttgaacgtcaagaaattaaagatgctatgggttatatgcgtcttatcaataac
aaagacgacgatgccgcctttgagcgagtggtcaacactcccgctcgtggtattggtgat
cggactttagacattgtccgcaccacggccagacagcatcagctaacgttatggcaagct
tgtgtgcatttaattgaagaaaaagtacttgctggacgtgcggcaaatgccattaatggc
tttatggagctaattatctcaatgcgcacagatacggcagatatgttgctgtatcggatg
gctgatagtgtgattgaccgttcaggtttacgcaccatgtacgaggccgagaaaggcgag
aaagcccaagcgcgaattgaaaacttaaatgagttagtcactgctgcgcgcagtttcgaa
atgccagaagagcttgaagatatgggcgagcttaatgcctttttgtctcatgcagcatta
gaagcaggcgagggacaggctgatgcctttactgatgcagtgcaattgatgacgttgcat
tcagccaaagggcttgagttcccaatggtatttatggctggcgttgaggaaggactattc
ccaagcaagatggcattggatgaaggcgatcgtttagatgaagagcgccgtttgtgttat
gtcggtatgacccgtgcaatgcaaaaactgtatatcagttatgctgaatctcgtcgtatt
tatggtcgtgaagattatgctagcccatcacgttttattaacgaaatccctgaaaaattc
gttgagcaaattcgtatacgtgctcaagttactccatcggttagcaagcgttttcctgct
cgtgcagcggcggttgtggtgaccaagaaacctcatggctttaatgacacgggccataaa
gtgggttctaaagtgaaacactttaagtttggtgaaggggttgtgactagctttgaaggt
tctggagaaaaaggccgtgtgcaagttaattttgtcgattttggcagtaaatggctgtta
gtgtcgttagcaaagttagagcgttgttaa
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