Shewanella livingstonensis: EGC82_19505
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Entry
EGC82_19505 CDS
T05875
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slj03032
]
EGC82_19505
03036 Chromosome and associated proteins [BR:
slj03036
]
EGC82_19505
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_19505
DNA replication proteins [BR:
slj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGC82_19505
Chromosome and associated proteins [BR:
slj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EGC82_19505
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EGC82_19505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
SSB
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AZG74746
UniProt:
A0A3G8LYI8
LinkDB
All DBs
Position
4474339..4474611
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIAKIAENAELTKAEAGRALKSFEQAVTEAMKNGDKISIVGFGSFETTQRAARTG
RNPQTGKEIQIAAATVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaattaattgcaaaaatcgctgaaaatgcggaactaactaaagctgaa
gctggccgcgctctaaaatctttcgaacaagcggtaactgaagccatgaaaaatggtgat
aaaatttctattgttggttttggttcttttgaaaccacgcaacgtgccgctcgtactggc
cgtaacccacaaactggcaaagaaattcaaattgcagcagctacagtgcctaaatttaaa
gccggaaaaacactaaaagatagcgttaattaa
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