Shewanella livingstonensis: EGC82_20410
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Entry
EGC82_20410 CDS
T05875
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGC82_20410 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slj03019
]
EGC82_20410 (groL)
03110 Chaperones and folding catalysts [BR:
slj03110
]
EGC82_20410 (groL)
03029 Mitochondrial biogenesis [BR:
slj03029
]
EGC82_20410 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slj04147
]
EGC82_20410 (groL)
Enzymes [BR:
slj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EGC82_20410 (groL)
Messenger RNA biogenesis [BR:
slj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EGC82_20410 (groL)
Chaperones and folding catalysts [BR:
slj03110
]
Heat shock proteins
HSP60 / Chaperonin
EGC82_20410 (groL)
Mitochondrial biogenesis [BR:
slj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EGC82_20410 (groL)
Exosome [BR:
slj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EGC82_20410 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EGC82_20410 (groL)
Exosomal proteins of breast cancer cells
EGC82_20410 (groL)
Exosomal proteins of colorectal cancer cells
EGC82_20410 (groL)
Exosomal proteins of bladder cancer cells
EGC82_20410 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZG74902
UniProt:
A0A3G8M196
LinkDB
All DBs
Position
complement(4661363..4663000)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPMITKDGVSVAKEI
ELTDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKLLSQECSDTKAIAQVGTISANSDESIGDIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSIELDSPFILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIKDVEVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMIADVPQDSAPDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtcttatttggtaacgacgcacgcgtaaaaatgcttgcaggcgtt
aacattctagccaacgcagttaaagtaaccttaggccctaaaggtcgtaacgttgtttta
gataaaagctttggctcgccaatgatcaccaaagatggtgtgtcagtggctaaagaaatc
gaactaacagacaagttcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaatgatgcagccggtgacggtaccactactgcaacagtattagcacaagctattgtt
gttgaaggcctaaaagcagttgcagcgggtatgaacccaatggaccttaagcgcggtatc
gacaaagcggttatcgcagccgttgctgaacttaaactcctttctcaagagtgttcagac
actaaagctattgctcaagtaggtacaatctctgctaactctgacgagtcaatcggcgac
atcattgcaacagcaatggaaaaagtcggtaaagaaggcgttatcaccgttgaagaaggc
caagcgcttgaaaacgaattagacgttgttgaaggtatgcagtttgaccgtggttactta
tcaccatacttcatcaacaagccagaaactggcagcattgaattagacagcccattcatt
ttattagtagacaaaaaagtctctaacatccgtgaattgctaccaatccttgaaggtcta
gctaaaacaggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
acactcgttgtgaacaacatgcgtggcatcgttaaagtagctgctgttaaagcacctggt
tttggcgaccgtcgtaaagcaatgcttcaagacgttgctatcctaactggcggtactgtt
atcgctgaagaaatcggtctagaacttgaaaaagccactctagaagatttaggtacagct
aagcgcgtcatcatcactaaagataacactaccatcatcgatggtagtggcgaccaagtg
caaatttctgcacgtgtttcgcaaatcaaacaacaagttgaagattcaacttcagactac
gacaaagaaaagcttcaagagcgtatggctaagttagctggcggtgttgcagtaatcaaa
gttggcgcagcaacagaagttgaaatgaaagagaaaaaagcgcgcgtagaagatgcattg
catgcaactcgcgcagcggttgaagaaggtgtggtcgccggtggcggtgtagcccttgtt
cgcgtagcaagcaaaattaaagatgttgaagtattgaacgaagaccaaaaacacggtgtg
gtaatcgcactacgtgctatggaagcgcctttacgtcaaatcgcaactaacgcaggtcaa
gaagcatcagttgtggctaacactgttaaaaacggtgaaggtaacttcggttacaatgct
ggcaacgacacttacggcgacatgttagaaatgggtatccttgacccaactaaagtgacg
cgtagtgcgctacagttcgccgcatctattgctggtcttatgatcacaacagaagcgatg
attgctgacgtaccacaagattctgcgccagatatgggtggtatgggtggtatgggcgga
atgggcggcatgatgtag
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