Streptomyces lunaelactis: SLUN_23800
Help
Entry
SLUN_23800 CDS
T06347
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
slk
Streptomyces lunaelactis
Pathway
slk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLUN_23800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slk03021
]
SLUN_23800
03400 DNA repair and recombination proteins [BR:
slk03400
]
SLUN_23800
Enzymes [BR:
slk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLUN_23800
Transcription machinery [BR:
slk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLUN_23800
DNA repair and recombination proteins [BR:
slk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLUN_23800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AVZ74741
UniProt:
A0A2R4T6P4
LinkDB
All DBs
Position
5152442..5156341
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQVENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLNEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEERKVIGE
GRSFGSSAEATMAFDNRELSLQAKVDIRFPVGTIPPRGWTPPAREEGEPEWQQGDTFRLR
TTLGRALFNELLPEDYPFVDYTVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFFWAT
RSGVTVAISDIVVPDAKKAIVKGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNANFPKTNPVSMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLRIAERG
ADGVLRKAEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDAVVAAGVEEVKTRSVL
TCESAVGTCAYCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKLVVTPDDGSEETAFPISKRARL
LVGEDDRVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggtcttgcgaccgcggacgacatc
cgacagtggtcccacggcgaagtgaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacattgagctggccgcgcct
gtcacccacatctggtacttcaagggcgtcccctcgcgccttggctacctgctcgacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccggacgcgcgacctgccctcgctggaggcccatgtctccgtcgagcgccag
caggtcgagaaccgccgcgactccgacctcgaggcccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggt
gccgagcgtgagatgaagcagctgcgtgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtgtggacccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctgaatgaagaggccgagcggcttcgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aatgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggtcgcccggtgaccggtcccggtaaccgcccgctgaag
tctctcagcgacatgctgaagggcaagcagggtcgattccgtcagaaccttctcggtaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctccgaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgtccgcagaggcgcaggccgaggcacgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggccgtccggtcaccatgccgacccaggac
atggtgctgggtctgttcttcctcacgaccgacgaggaagagcgcaaggtcatcggcgag
ggccggtccttcggctccagcgccgaggcgaccatggcgttcgacaaccgggagctctcg
ctccaggcgaaggtcgacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcgcgggaagagggcgaacccgagtggcagcagggtgacaccttccggctgcgt
acgactctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacacggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggctgcgggcttcttctgggcgacc
cgttccggtgtcaccgtggccatctcggacatcgtggtccccgacgccaagaaggcgatc
gtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacccaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttcccgaagaccaacccggtctccatgatggtcaactcg
ggtgctcgcggaaacatgatgcagatgcgtcagatcgcgggtatgcgtggtctggtgtcc
aacgccaagaacgagaccatcccgcgtccgatcaaggcgtcgttccgcgagggcctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaagaggactgtggcaccgaccgcggcctcaagctgcggatcgccgagcgcggt
gccgacggtgtgctgcgcaaggcggaggacgtcgagacgtccgtgtacgcccgcatgctc
gccgaggacgtcgtcgtcgacggcaaggtcatcgcgccggccaatgtcgacctgggcgat
gtgctcatcgacgcggtcgtcgccgcgggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacgtgcgcgtactgctacggccgttcgctcgccaccggc
aagctggtggacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggctcgtacgcccaagggtgtcgccccg
atctcggaggcggcaggccgcgtccgtatcgaggagaccgagaagaccaagaagctcgtt
gtcacccccgacgacggcagcgaggagacggcgttcccgatctccaagcgtgcccgtctg
ctggtgggcgaggacgaccgcgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcggatcctcggtcagcgcgcggtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgccgagctgctgccg
ggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtcacggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcctcgctcgccacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggttctgaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtggagcccaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
DBGET
integrated database retrieval system
