Streptomyces lunaelactis: SLUN_29455
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Entry
SLUN_29455 CDS
T06347
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
slk
Streptomyces lunaelactis
Pathway
slk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SLUN_29455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slk03021
]
SLUN_29455
Transcription machinery [BR:
slk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLUN_29455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
BUD22
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
AVZ77710
UniProt:
A0A2R4TF20
LinkDB
All DBs
Position
6391875..6393428
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AA seq
517 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRARKSVAAKSPAKRTATKTVAAKTATAKTVAATAAPAAETVD
VQADEVEANAPAKKAAAKKTAAKKTAAKKTVAKKTVAKKTAGKKDSDEAAEGEEVDEAQP
GAKGEEEEAEGENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEV
ELAKRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYT
GRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVH
MVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDG
DSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDE
IGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgaatctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgccgaagcgcgcc
cgcaagagcgtcgcagcgaagagcccggcaaagcgcaccgccaccaagaccgtcgcggcc
aagaccgccacggcgaagaccgtcgcggccaccgcggcgccggcggccgagaccgtcgac
gtccaggccgacgaggttgaggcgaacgcgcctgccaagaaggcggccgccaagaagacg
gcagccaagaagacggcggcgaagaagaccgtcgccaaaaagaccgtggccaagaagacc
gcgggcaagaaggactccgacgaggccgccgagggcgaagaggtcgatgaggcccagccc
ggtgccaagggcgaggaggaagaggccgagggcgagaacaagggcttcgtcctctccgac
gacgacgaggacgacgcgcctgcgcagcaggtcgcggtcgccggcgccaccgccgacccg
gtcaaggactacctcaagcagatcggcaaggtcccgctcctcaacgccgagcaggaggtc
gagctcgccaagcgcatcgaggcgggcctgttcgccgaggacaagctggcgaacgccgac
aagctcgcgccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgcc
aagaaccacctgctggaggccaacctccgcctggtcgtctcgctggccaagcgctacacc
ggccgcggcatgctcttcctggacctgatccaggagggcaacctgggtctgatccgcgcg
gtcgagaagtttgactacaccaagggctacaagttctccacgtacgccacctggtggatc
cgtcaggcgatcacccgcgccatggctgaccaggcccgcaccatccgtatcccggtgcac
atggtcgaggtcatcaacaagctcgcgcgcgtccagcgtcagatgctccaggacctgggc
cgtgagcccaccccggaggagctggccaaggagctcgacatgacccccgagaaggtcatc
gaggtccagaagtacggtcgcgagccgatctccctccacacccccctgggtgaggacggc
gacagcgagttcggtgacctcatcgaggactccgaggcggtcgtaccggccgacgcggtc
agcttcacgctcctgcaggagcagctgcactcggtgctcgacaccctgtccgagcgtgag
gcgggcgtggtctccatgcgcttcggtctcacggacggccagccgaagaccctggacgag
atcggcaaggtctacggcgtgacgcgtgagcgcatccgtcagatcgagtccaagaccatg
tcgaagctgcgtcacccgtcgcgttcgcaggttctgcgcgactacctcgactag
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