Streptomyces lunaelactis: SLUN_30660
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Entry
SLUN_30660 CDS
T06347
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slk
Streptomyces lunaelactis
Brite
KEGG Orthology (KO) [BR:
slk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slk03016
]
SLUN_30660
Enzymes [BR:
slk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SLUN_30660
Transfer RNA biogenesis [BR:
slk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SLUN_30660
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AVZ75920
UniProt:
A0A2R4T9V5
LinkDB
All DBs
Position
complement(6696462..6697736)
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AA seq
424 aa
AA seq
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MTDAQETAAETALRTTGGAPPDDVEPAPIPLLEPRDGIPPVVATDDALAQVIAAFASGTG
PVAVDAERASGYRYGQRAYLVQLRREGAGTALIDPVGCPDLSGLGEALAGTEWILHAATQ
DLPCLREIGMIPTRLFDTELAGRLAGFPRVGLGAMVESVLGYALEKGHSAVDWSTRPLPE
PWLRYAALDVELLVDLRDALEKELDRQGKLDWARQEFDAIASAPPAPPRKDPWRRTSGMH
KVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLSDGAIVEAALAVPANLPALTALPGFGH
RMGRRQLEQWQAAVDRAKDLSDAELPQPGQPLNGPPPPRSWADKDPAAAARLSAARAAVS
ALAEELNLPQENLITPDTVRRVCWEPPAEATVEAVSAALAGHGARAWQIELVAPLLTRAL
TATA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagagacagcactgcgaaccaccgggggcgctccc
ccggacgacgtcgaaccggcgccgattcccttgctggagcctcgtgacggcattccgccg
gtggtagccaccgacgatgccctcgcccaagtgatcgccgcctttgcctcaggcaccggc
cctgtcgccgtcgacgccgagcgcgcgtccggctaccggtacggccagcgggcctatctc
gtgcagctgcgccgcgaaggcgcgggcaccgcactcatcgatccggtcggctgccccgac
ctctccgggctcggcgaggccctcgccgggacggagtggatcctgcacgcggccacccag
gatcttccgtgtctgcgcgaaataggcatgatccccacccggctgttcgacaccgagctg
gccgggcgcctcgcgggcttcccgcgggtcgggctcggcgcgatggtcgagagcgttctc
gggtacgcgctggagaagggccactccgcggtcgactggtccacccgcccgctccccgag
ccctggctgcgctacgccgcgctcgatgtggagctgctggtggacctgcgcgacgccctg
gagaaggagctggaccggcagggcaagctggactgggcccgccaggagttcgacgcgatc
gcctcggccccgccggctccgccgcgcaaggacccctggcggcgtacgtccgggatgcac
aaggtgcgccgccgccggcagatggcggtcgtacgggagctgtggacggcccgcgacaag
gttgcccagcggcgtgatgtgtcgccgggcaaggtgctgagcgacggcgcgatcgtcgag
gccgcgctcgccgtaccggcgaatctcccggcgctgaccgcgctgcccggcttcggccac
cggatggggcggcgtcagctggagcagtggcaggccgcggtggaccgggccaaggacctg
tccgacgccgagctcccgcagccgggccagccgctcaacggaccgccgccgccccgttcc
tgggcggacaaggacccggcggccgcggcccgcctctccgcggcgcgcgcggcggtctcc
gcactcgcggaggagctcaacctgccgcaggagaacttgatcactccggacacggtccgg
cgggtgtgctgggagccgccggcggaggcgacggtggaggcggtgtcggcggcgctggcg
ggacatggggcacgcgcctggcagatcgagctggtggccccgctccttacgcgtgcgctg
acggcgacggcctga
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