Spiroplasma litorale: SLITO_v1c00550
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Entry
SLITO_v1c00550 CDS
T04047
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sll
Spiroplasma litorale
Pathway
sll03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLITO_v1c00550 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sll03400
]
SLITO_v1c00550 (uvrB)
DNA repair and recombination proteins [BR:
sll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLITO_v1c00550 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SLITO_v1c00550 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
P-loop_SecA
AAA_7
UB2H
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKX33723
UniProt:
A0A0K1W0M0
LinkDB
All DBs
Position
57176..59161
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AA seq
661 aa
AA seq
DB search
MMEREYRDFELVTNYKPSGDQPRAIKSLVEGLKNNKKNQVLLGATATGKTFTMANVIKEI
NKPTLILAHNKTLAMQLYIELKEFFPKNRVEYFVSDFDFYQPEAYVAARDLYIDKDARRN
NDLAMMRLSVMNALVTRKDVIVVASVAAIYASQDPEEYSKVFFELKVGQAISKKDLLTFL
VRTGYVRNDTALEMGCFSAKGDVINIAPSWTDNYNIRISLFGDEIEAIEMIDSLNNNVID
RLRLFTVFPASAYITNFDKLKIVIDNIRNELNHRVDELNKLGKFIEADRLLKRTNYDLET
MAEFGVCNGIENYSAHLDFRMPGEPPFTIIDYFGDDFLTIIDESHMMIPQVRGMYNTDRS
RKTTLVEYGFRLPSALDNRPLNFEEFTSRLKNVIYTSATPGDYELELTNNEVVEQIIRPT
GLVDPIIETRPTTNQFEDMIKEIKIRMEKKQKVFITTLTIKSSEDISFHLQSRNIKVAYL
HSELKTLERNQVLNDLRRGIYDVIVGVNLLREGLDIPEVSLVCILDADKQGFLRNTRSLI
QTIGRAARNSDGVVIFYADTFSASMKEAIEETDRRRSIQQEYNVKNNIVPKTIIKKIIDI
DGEFNLRDKLSKLTDSKTKQKKLEKEKLVKDLRKKMLQAAKEENYEKAAELRDLIIEIEA
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaagagaatatagagattttgaattagtaacaaactacaaaccaagtggagat
caaccaagagcaataaagagtttggttgaaggtttaaaaaataataaaaaaaaccaggtt
ttattaggtgcgactgcaacaggtaaaacgtttacaatggctaatgtaattaaagaaata
aataagccaactttaatacttgcacataataaaactttagcaatgcaattgtatatagaa
cttaaagagttctttccaaaaaatagagtagaatattttgtttcggattttgatttttat
caaccagaagcctatgttgctgcaagagatttatatattgataaagatgcgagaagaaat
aacgacctggctatgatgagattgagtgttatgaatgcgcttgttacaagaaaagatgtt
atagttgttgcaagtgttgctgcaatttatgcatctcaagaccctgaagaatatagtaaa
gttttttttgaactaaaggtaggacaagcgatctctaaaaaagatttattaacttttcta
gttagaactggttatgttagaaatgatacagcattagaaatgggttgtttcagtgcaaaa
ggtgatgtaataaacattgctccaagttgaacagataattataatattagaatttcttta
ttcggagatgaaatagaagctatcgaaatgatagattcacttaataataatgtaattgat
agactaagactgttcactgtttttcctgcgtcagcatacataactaattttgacaaatta
aaaatagttattgataacattagaaatgaattaaatcatagagttgatgaattgaataaa
ctaggtaaattcattgaagcagatagattattaaaaagaacaaattatgatctagaaaca
atggcagagtttggggtttgtaatggaattgaaaactattcagctcacctagattttaga
atgccaggtgaaccaccttttacaataattgattattttggagatgactttctaactata
atagatgaatcacatatgatgattccgcaggtaagaggtatgtataacactgacagaagc
agaaagactactttggttgaatatggttttagacttccaagcgctttagataatagacca
ttaaattttgaagagtttacttcaaggcttaaaaatgtaatatatacttctgcaacccca
ggagattatgaattagagttaacaaataatgaagtagtagaacagattattagacctact
ggccttgtagatccaataattgaaaccagaccaacaaccaatcaatttgaggatatgata
aaagaaataaaaataagaatggagaaaaaacaaaaagtattcattacaactttaacaatt
aaaagttctgaagatatttcatttcatcttcaatcaagaaatattaaagttgcatatctt
cactctgaattaaaaacacttgaacgtaaccaagtcctaaatgatttaagaagaggaatt
tacgatgtgattgtcggagttaacttgttaagagaaggtttagatatacctgaggtaagc
ttagtttgtattttggatgcagacaagcaaggatttttaagaaacacaagaagtttaatc
caaactatcggtagagcagcaaggaactctgatggtgttgttatattttatgcagataca
ttttcggcatctatgaaagaagcaattgaagagacagatagaagaagatcaatccagcaa
gaatataatgtaaaaaataatatagtaccaaaaactataattaaaaaaataattgacata
gacggcgagtttaacttaagagataaattaagtaagttaactgactctaaaacaaaacaa
aaaaaattagaaaaagaaaaacttgtaaaagatttaagaaaaaaaatgttacaagcagca
aaagaagagaattacgaaaaggctgctgagcttagagatctaattattgaaatcgaagct
agttag
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