Spiroplasma litorale: SLITO_v1c01610
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Entry
SLITO_v1c01610 CDS
T04047
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sll
Spiroplasma litorale
Pathway
sll03030
DNA replication
sll03430
Mismatch repair
sll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLITO_v1c01610 (dnaE)
03430 Mismatch repair
SLITO_v1c01610 (dnaE)
03440 Homologous recombination
SLITO_v1c01610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sll03032
]
SLITO_v1c01610 (dnaE)
03400 DNA repair and recombination proteins [BR:
sll03400
]
SLITO_v1c01610 (dnaE)
Enzymes [BR:
sll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLITO_v1c01610 (dnaE)
DNA replication proteins [BR:
sll03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLITO_v1c01610 (dnaE)
DNA repair and recombination proteins [BR:
sll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLITO_v1c01610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
CDC24_OB3
Chal_sti_synt_C
SSFA2_C
Motif
Other DBs
NCBI-ProteinID:
AKX33827
UniProt:
A0A0K1W158
LinkDB
All DBs
Position
176853..179849
Genome browser
AA seq
998 aa
AA seq
DB search
MKYCNILGVQTCYNFLDSTIKIKDYINFLVENNIKTAFYADKNIMFGALEFFEECNSKNI
KPIIGLNFELDGADVYLYCKNNNGYKKVISLCTKIQENLENNIKMDFEQIEEFISNDIFW
IFDPIIKQAKYYLLIKLKLEENNIFYSLSSKNTSFKDNRSIFTSKINYLYKEDFDSYKAL
KSINEGINYDELNIDNDKFYLDIEKISNDIDIDIHNSNIQYIIDNVIDDVVYDNKIHFLK
YPNSLKMPSDSYLKFICENKLEEYVIKNNISDKNIYKKRLEKELETIFKMGFSDYFLVVN
DFVIYAKENNILHGPGRGSAAGSLVSFLLEITKIDPIKYNLIFERFLNIDRVTLPDIDID
FQDDRREEIVEYLFNKYKKYHFATISTFQTIGIKNALRDCGRIFGIPVSDINEMSKNVSP
NNLFDLEKAVNENITLTKFSKMYPKIFSISKKIIGLPRQSGTHAAGVVFCDEELYKVVPL
KVGINGILQTQYGMNYLEKIGLIKTDILGLRNLTIIQEVIKNIEKNNKIKFNLEDINLYD
EMTFQTLQNGETSGIFQLESNGMTDLVKRMKISSIEEIAITSALFRPGPQDNIDLLLNRK
NKVVKTTYINESIKNILEPTYGIIVYQEQVLEIFKKVASLSYNQADIIRRAISKKNFDLI
RSEKDIFIKKAEENGYSQKDSIDLWNYIEKFADYGFNKSHAIAYSIISYWMAFLKTHYKA
DFYCSLLNGVIRNENKTSQYIQELKKYNYNIIAPSIKNPNHIYFSKANNIFMPLGVIKYI
GPEFLKKLKEIFIKDKFVFNNLLKLLTTLYKTTLTEQKYLALAYAGAFDNFQISRKSLIL
FKDQIFNLLRVIDNLKNNDIEILLPNFKDDKEDLLEYEKEYIGFYVSSHPIIELRKKIKN
IDKLTKINALELPDMQVNILVYVDIIQIKKDKNDKEMCFLSCSDETGKIDLTIFSSIYND
IKDRIQKSGYYIFLIKSQYYKDNITFSLIDIKKEIKKV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattgtaatattttaggagtgcagacttgctataactttttagattcaactata
aaaataaaagattatatcaatttcttagtggaaaataatatcaaaacagcattttatgca
gacaaaaatattatgtttggtgctttggagttttttgaagaatgcaattcaaaaaacatt
aaacctataattggcttaaattttgaacttgatggcgctgatgtgtacttatattgcaaa
aataataatggctataaaaaagtaattagtctttgtacaaaaatacaagaaaatttagaa
aataatataaaaatggattttgaacaaattgaagaatttatttcaaatgatattttttga
atatttgaccctataataaaacaagctaaatattatttgttaataaaattaaaattagag
gaaaataatattttttattcattaagttctaaaaatactagttttaaagataatagatca
atttttacaagtaagataaactacttatacaaagaagattttgatagttacaaggctctt
aaatcaattaatgaaggcataaactatgatgaattaaatatcgataatgataagttttat
ttagatattgaaaaaatatcaaacgatattgatattgatatccataatagtaatattcaa
tatattatagataatgttattgatgatgttgtttatgataacaaaatacattttttaaag
tacccaaatagtttaaaaatgccatctgattcttacttaaaatttatttgtgaaaataaa
ttagaagaatacgttataaaaaataatataagtgacaaaaacatatataaaaaaagatta
gaaaaagaattagaaacaatattcaaaatgggattttctgattattttcttgttgtaaat
gattttgttatttatgcaaaagaaaataacattttacatggaccaggaagaggttccgcc
gctggtagtttagtttcttttttacttgaaattacaaagatagacccaattaaatataat
ttaatatttgaaaggtttttaaatatagatagagttacattgccagatatagacatagat
tttcaagacgatagaagagaagaaatagtggaatatctatttaataaatataaaaaatat
cactttgcaacaatatctacatttcaaacaattggtataaaaaatgccctaagagattgt
ggtagaatttttggaatcccagttagtgatattaatgaaatgtctaaaaatgtaagtcca
aataatttatttgatctagaaaaagcagttaatgaaaatataactcttactaaattcagt
aagatgtacccaaaaatttttagtatatctaaaaaaataattggtttaccaagacaatct
ggtacacacgctgcaggtgtagttttttgtgacgaagaattatataaagtcgttccatta
aaagttggtataaatggtattttacaaacacaatatggtatgaactacttagaaaagatc
ggacttatcaaaactgatattttaggcttaagaaatttaacgattatacaagaagtaatt
aaaaatattgaaaaaaacaataaaattaaatttaatctggaagatataaatttatatgat
gaaatgacatttcaaaccctgcaaaatggtgaaacctcaggaatttttcaactagaatca
aatggaatgacagatttagtaaaaagaatgaaaataagttctattgaggaaatagcaatt
acaagtgctctatttagaccaggtccacaagacaatattgatttactattaaatagaaaa
aataaagttgtaaaaacaacatacataaatgaaagtataaaaaacatattagaacctact
tatggaatcatagtatatcaagaacaagttttagaaatatttaaaaaagttgctagcctt
tcatataatcaagcagacataattagaagggctataagtaagaaaaactttgatttaata
agaagtgaaaaagatatttttatcaaaaaagctgaagaaaatggttattctcaaaaggat
tcaattgacctatgaaattatattgaaaaatttgcagattatggttttaataagtcacat
gcaattgcatactcaataataagttattgaatggcatttttaaaaactcattacaaggct
gatttttattgttcattattgaatggtgtaatacgaaatgaaaataaaacaagtcaatac
attcaagaacttaaaaaatataattacaatataattgctccaagcataaaaaatcctaat
catatttatttttctaaagctaacaatatatttatgcctcttggggtgataaaatatata
ggaccagagtttttaaaaaaacttaaagaaatatttattaaagataagtttgtttttaat
aatcttttaaaacttttaaccactttgtacaaaacaacattaactgagcaaaaatatttg
gcgcttgcatatgctggtgcttttgataattttcaaataagtagaaaaagtcttatttta
tttaaagatcaaatttttaatctcttaagagtaattgataatttaaaaaataatgatata
gaaatattgttaccaaattttaaagatgataaagaagatttattagaatacgaaaaagaa
tatattggtttctatgtgtcgtctcatccgataattgaattaagaaaaaaaattaaaaat
atagataaattaactaaaataaatgccttggaactgcctgatatgcaagtaaatatttta
gtttatgttgatattattcaaataaaaaaagataaaaatgacaaagaaatgtgtttttta
tcttgcagtgatgaaaccggaaaaatagatttaacaatattttcaagtatttacaatgat
ataaaagatagaattcaaaaatcaggttactatatatttttgattaaatctcaatattac
aaagataacatcacttttagtttaatcgatattaaaaaagaaattaagaaagtttaa
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