Spiroplasma litorale: SLITO_v1c02160
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Entry
SLITO_v1c02160 CDS
T04047
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sll
Spiroplasma litorale
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sll03019
]
SLITO_v1c02160 (cbf)
Messenger RNA biogenesis [BR:
sll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLITO_v1c02160 (cbf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
FliMN_C
Motif
Other DBs
NCBI-ProteinID:
AKX33877
UniProt:
A0A0K1W1A8
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All DBs
Position
237600..238565
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AA seq
321 aa
AA seq
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MISDLNLEAKSVNLTARIERVVLSTGNNGLNYLIVHLIDKTGRIEARLWNVSDDDILNLK
AGSIVKIEANINSYRHQLQLKINNYVIIQEEEFDDYKISHDMFSINAPLNIDQKFKELLN
FIESLKNDNYKNITISLLKEYEEDFKNYPAAVSIHHNVVGGLFWHSSSILEAAMALKKVY
SFIEIDWDLVYCGAILHDIGKVIELEGKNASEYTSKGKLLGHISIGSNFVFDKAKSLKIE
SEDTIKLQHVILSSHGKNEFGSPIEPLLIESIIISTLDSLDARLYRVNEELKKVSNSNWT
PRILSEDGRSFLRHFEKPKKN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgataagtgatttaaatttagaagcaaaaagtgtaaatttaacagcaagaattgaaaga
gttgttttatcaactggaaacaatggtctcaattacttaatagttcacctaattgataaa
acaggtagaatagaagccagattatgaaatgtctctgatgatgatatattaaatttgaaa
gctggttctattgttaaaatagaagcgaatataaatagttatagacaccaattacaatta
aaaataaataactatgttattattcaagaagaagaatttgatgattataaaatctctcac
gatatgttctcaattaatgctcctttaaatatagaccaaaaatttaaagaattattaaat
tttatagagtctttaaaaaatgataactataaaaatattacaataagtttattaaaagag
tatgaagaagattttaaaaactatccagcagccgtaagtattcatcataacgtcgttggt
ggattattttgacacagtagttcaattttagaagctgcaatggctctaaaaaaagtatat
tcatttattgaaattgattgagatttagtttattgtggggctattttgcatgatattggt
aaagtaattgaactagagggaaaaaatgcgagtgagtatacttcaaaaggaaaattacta
ggacatatatcaataggaagtaattttgtatttgataaagcaaaaagtttgaaaattgaa
tctgaagacacaattaagttgcaacatgttatattatcaagtcatggaaaaaatgaattt
ggatcaccgattgagccgttactgatagaaagcataattatatcaacattagatagttta
gatgctcggttatatagagttaatgaagagttaaaaaaagtgtccaatagtaattgaaca
ccaagaatattatctgaagatggaagaagttttttaaggcattttgaaaaacctaaaaaa
aactaa
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