Spiroplasma litorale: SLITO_v1c03560
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Entry
SLITO_v1c03560 CDS
T04047
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sll
Spiroplasma litorale
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sll03019
]
SLITO_v1c03560 (cshB)
03009 Ribosome biogenesis [BR:
sll03009
]
SLITO_v1c03560 (cshB)
Enzymes [BR:
sll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SLITO_v1c03560 (cshB)
Messenger RNA biogenesis [BR:
sll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SLITO_v1c03560 (cshB)
Ribosome biogenesis [BR:
sll03009
]
Prokaryotic type
rRNA helicases
SLITO_v1c03560 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
PhoH
Occludin_ELL
Motif
Other DBs
NCBI-ProteinID:
AKX34010
UniProt:
A0A0K1W103
LinkDB
All DBs
Position
389455..390816
Genome browser
AA seq
453 aa
AA seq
DB search
MSFEKFGFKKFINDAIVEIGFKEPTGIQNKVIPLLKKYSSVIAQSHTGTGKTHAFLLPVI
NNIKQQEKKVQCLIITPTRELARQIFNNTKELLKFNNDINVSMFVGGEDFEKHTNSLLDK
QPQIVIGTPSRLKKLYEENYLKLTTSNYVIIDECDMIFDLGFIDEVDFLLSKINKECNIS
LFSATLNNELKPFLKKYLKNAHYINNLENLSTNKNIEHILIWTRNKDNKEVIRILTEKIN
PYVCIIFVNKKEEIKSIVNWFKEFKIDNFTELHGDLDPRQRVIIQKRIKNMDFKWIIASD
VAARGIDIDGVSHIISVNLPNDLNYYIHRSGRTGRNKYEGISYVLHNSDNQDKINKLKTK
NISFTNMKLVNGELIKIEQKQKKQPKENSALATETSKIINKYKSKKIKPGYKKKRKLEIE
TFKKQLKRKHIKESIEKIKKAKYIKRREDLFEE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaaagtttggatttaaaaaatttataaatgatgcaattgtcgaaattggt
tttaaagaaccaacaggaatacaaaataaagtaatacctttattaaaaaaatattcttct
gtaattgctcaatctcatacaggtactggtaaaactcatgcttttttgttacctgttata
aataatataaaacaacaagaaaaaaaagttcagtgtttaataataacaccaacaagagaa
cttgcaagacaaatttttaacaacacaaaagaattgttaaaatttaataatgatataaat
gtttcaatgtttgttggtggagaagattttgaaaaacacactaattctttattagataaa
caaccacaaattgtaattggaaccccttcaagacttaaaaaattatatgaagaaaattat
ttaaaattaacaacttcaaattatgtaattattgatgaatgtgatatgatatttgacctt
ggttttatagatgaagtagattttttattatcaaagatcaacaaagaatgcaatatatct
ttattttctgcaactttaaataatgaattaaaaccttttttaaaaaaatatctaaaaaat
gcacactacataaataatttagaaaatttatcaactaacaaaaatatagaacatatatta
atatgaactagaaataaagataataaggaagttattagaattttaacagaaaaaataaat
ccctatgtttgtattatttttgtaaataaaaaagaggaaattaaaagtattgtaaactga
tttaaagagttcaagattgataattttacagaattgcatggtgatttagatccaaggcaa
agagtaataatacaaaaaagaataaaaaatatggattttaaatgaattatagcaagtgac
gttgctgctagaggaattgacattgatggtgtaagtcacataatttctgttaatttacca
aatgatttaaattattatattcatcgtagtgggagaacaggaagaaataaatatgaagga
ataagttatgttcttcataattctgataaccaagataaaattaataaattaaaaactaaa
aatatttcttttacaaatatgaaattagtaaacggtgaattgataaaaatcgaacaaaaa
caaaaaaaacaacccaaagaaaactcagcacttgcgactgagacaagtaaaataataaac
aaatataaatcaaaaaaaattaaaccaggttacaaaaaaaagcgtaaacttgaaatagaa
acatttaaaaaacagttaaaaagaaaacacattaaagaatcaattgaaaaaattaaaaaa
gcaaaatacataaaaagaagagaagatttatttgaagaataa
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