Spiroplasma litorale: SLITO_v1c08300
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Entry
SLITO_v1c08300 CDS
T04047
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
sll
Spiroplasma litorale
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sll03032
]
SLITO_v1c08300 (hupB)
03036 Chromosome and associated proteins [BR:
sll03036
]
SLITO_v1c08300 (hupB)
03400 DNA repair and recombination proteins [BR:
sll03400
]
SLITO_v1c08300 (hupB)
DNA replication proteins [BR:
sll03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLITO_v1c08300 (hupB)
Chromosome and associated proteins [BR:
sll03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SLITO_v1c08300 (hupB)
DNA repair and recombination proteins [BR:
sll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SLITO_v1c08300 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AKX34445
UniProt:
A0A0K1W289
LinkDB
All DBs
Position
complement(916730..917005)
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AA seq
91 aa
AA seq
DB search
MTKKELSEKLSVNFSTSKAEAEKMVNYIFEEITNALTSKEEVQIAGFGKFLTSDRAAREG
VNPATGAKIQIAATTVAKFKAAKQLKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattatcagaaaaattatcagtaaattttagtacttctaaagcagaa
gcagaaaaaatggtaaattatatatttgaagaaatcacaaatgctttaacaagtaaagag
gaagttcaaatcgcagggtttggtaaattcttgacaagtgatagagcagctcgtgaaggt
gttaatccagcaactggtgcaaaaattcaaattgcagctacaactgtggcaaaatttaaa
gcagctaaacaattgaaagatgcagttgctaagtag
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