Spiroplasma litorale: SLITO_v1c09760
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Entry
SLITO_v1c09760 CDS
T04047
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sll
Spiroplasma litorale
Pathway
sll03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sll00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLITO_v1c09760 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sll03021
]
SLITO_v1c09760 (rpoA)
03400 DNA repair and recombination proteins [BR:
sll03400
]
SLITO_v1c09760 (rpoA)
Enzymes [BR:
sll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLITO_v1c09760 (rpoA)
Transcription machinery [BR:
sll03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLITO_v1c09760 (rpoA)
DNA repair and recombination proteins [BR:
sll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLITO_v1c09760 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AF1548-like_C
TelK_muzzle
Egh16-like
Motif
Other DBs
NCBI-ProteinID:
AKX34587
UniProt:
A0A0K1W3A2
LinkDB
All DBs
Position
complement(1069016..1069972)
Genome browser
AA seq
318 aa
AA seq
DB search
MKQFSRPEFKLLKEEKSKNYGEFQVEPLERGFGITLGNALRRTLLSSTPGAAVYAIKLEK
AAHEFTSIEGIVENVSRIILNIKKLAIRIDTKMFEDDEVVELKLKTSTVGVVTAGDVEVP
TGVEIVNKDLKLCTIADGGSINLIMFAKNSRGYRTFKDNKKEKMLLADAITIDSNYSPIL
NVSYEVETTKIGKSVDLEKLVMKVETNGTLSVGDAIATAAKILVEHLEFFVNLNEEISDI
KVIGATSEEDEKELDKLVEELDFTQRSLNCLKRANINTLRDLVSKSEDDIQEIRNLGRKS
LKEIKDKVVQLGLTFRQE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattttcaagacctgaatttaaattattaaaagaagaaaaaagtaaaaattat
ggggaatttcaagtagaacctcttgaaagaggttttggtattactttaggtaatgcttta
agaagaactttactatcttcaacaccaggtgcagcagtttatgcgattaaactagaaaaa
gcagcacatgaatttacttcaattgaaggtatcgtagaaaatgtaagtagaattatttta
aatattaaaaaacttgcaattagaattgatactaaaatgtttgaagatgacgaagtggtt
gagttaaaattaaaaacttcaacagttggagttgtaactgcaggagatgtagaagtacca
actggagttgaaatagtaaataaagatttaaaattatgtacaatcgctgatggtggaagt
ataaatttaataatgtttgctaaaaactcaagaggttatagaacattcaaagataataaa
aaagaaaaaatgttgttagcagatgctataacaattgactcaaattactcaccaatttta
aatgtttcatatgaagttgaaactacaaaaattggtaaatcagttgatttagaaaaactt
gttatgaaagttgaaactaatggtactctatctgttggagatgctattgcaactgctgct
aaaatattagtagaacacttagagttctttgtaaacttaaacgaagaaataagtgatatt
aaagtaattggagcaactagtgaagaagacgaaaaagagcttgataaattagttgaggaa
ttagactttactcaaagaagtttaaattgtttaaaacgtgcaaatataaacacattacgt
gatttagtatctaagagcgaagatgacatccaagaaattcgtaatctaggtagaaagtca
ttaaaagaaataaaagacaaagtagttcaactaggacttacatttagacaagaatag
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