Staphylococcus lloydii: ISP08_08570
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Entry
ISP08_08570 CDS
T07245
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sllo
Staphylococcus lloydii
Pathway
sllo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sllo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISP08_08570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sllo03019
]
ISP08_08570
Messenger RNA biogenesis [BR:
sllo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ISP08_08570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4152
Motif
Other DBs
NCBI-ProteinID:
QPM74397
UniProt:
A0A7T1AYD9
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All DBs
Position
1763630..1765429
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AA seq
599 aa
AA seq
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MKQINKNEVAVYALGGLGEVGKNTYAVEYQDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
EQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHHLLRTTELI
EITEESVIKSKHFEISFYLTTHSIPEAYGVIVNTPEGNIVHTGDFKFDFTPVGEPANIGK
MAKLGDEGVLCLLSDSTNALVPDFTLSEREVGQNVDKIFRNCTGRIIFATFASNIYRVQQ
AVEAAIKYGRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINSIPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYRAGAEVIHNKV
SNIHTSGHGSQGDQQLMLRLIRPKYFLPIHGEYRMLKAHGQSGIECGVAPENVFIFDIGD
VLALTHDSARKVGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKL
LSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNQNNSIQWHQIKSSIIETLQPYLY
EKTARKPMILPVIMKVNEDEDGNANSSKPQKERKSSNAKKTAKDNNAKPQKQQNDTESK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatcaataaaaatgaagtagctgtatatgcacttggtggcttaggtgaagta
ggtaaaaacacttatgctgtcgagtatcaggatgaaatcgtcattattgatgcaggtatt
aaattccctgacgataatttattaggtatagattatgtcattcctgattatacgtactta
gaacaaaaccaagataaaatcgttggtttatttattacgcatggacatgaagaccatata
ggtggtgtgccctacctgttaaaacaaattaatgtacctatttacggtggtccattagct
ttaggattaattagaaataaattagaagaacatcatttattaagaacaacagaattaata
gaaataactgaagaaagtgttattaaatcaaaacattttgaaatttcattttatttaacg
acgcatagtattccagaagcttatggcgttattgttaatacaccggaaggtaatattgtt
catactggtgactttaaatttgatttcacacctgttggcgaaccagctaatattgggaaa
atggctaaattaggtgacgaaggtgtattatgtctgctttctgattctacaaatgcactc
gtacctgacttcactttaagtgagcgtgaagtaggacaaaatgtcgataaaatttttaga
aattgtacgggccgtattatttttgcgacttttgcatctaatatttatcgtgttcaacaa
gctgttgaagccgctattaagtatggtcgtaagattgttacttttggtcgttcaatggaa
aataatatcaaaattggtatggaacttggttatatcaaagcaccaccagaaacttttgta
gaaccaaataaaattaatagtattcctaaacacgaattattaattttatgtacgggttct
caaggtgagccaatggctgctttatcacgtatagctaacggtacacataaacaaataaag
atcatccctgaagatactgttgtattcagctcatcacctattccgggtaatacgaaaagt
attaaccgtacaatcaattcattataccgtgctggtgcagaagttattcacaataaagta
tctaatattcatacttctggtcacggttcacaaggcgatcaacaattaatgttacgttta
attagaccaaaatacttcttaccaatccatggtgagtaccgtatgcttaaagcacatggt
caatcaggtattgaatgtggcgttgcaccagaaaatgtctttattttcgatatcggcgac
gttttagcactcacacacgattctgctcgcaaagttggtcgtattccatcaggtaacgta
ttagttgatggtagtggtatcggcgacataggtaacgtcgttatacgtgaccgtaaatta
ttatcagaagaaggtttagtgatcgtagttgttagtattgatttcaaaactaacaaacta
ctatctggaccagacattatttcacgtggctttgtttacatgcgtgaatcaggtcaatta
atttacgatgcacaacgcagaattaaaacagacgttatttcaaaattaaatcaaaataat
tcaatacagtggcatcaaataaagtcttcaatcatcgaaacattacaaccttatttatac
gaaaagacagcaagaaaaccaatgattttacctgtaattatgaaggtaaacgaggacgaa
gatggcaacgctaattctagtaaaccacaaaaagaacgtaaatcttcaaatgctaaaaaa
acagcaaaagataataacgcaaaacctcagaaacaacaaaatgacacagaatcaaaatag
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