Staphylococcus lloydii: ISP08_11140
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Entry
ISP08_11140 CDS
T07245
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sllo
Staphylococcus lloydii
Pathway
sllo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sllo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ISP08_11140 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sllo03021
]
ISP08_11140 (rpoB)
03400 DNA repair and recombination proteins [BR:
sllo03400
]
ISP08_11140 (rpoB)
Enzymes [BR:
sllo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ISP08_11140 (rpoB)
Transcription machinery [BR:
sllo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ISP08_11140 (rpoB)
DNA repair and recombination proteins [BR:
sllo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ISP08_11140 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
ATP-grasp_6
Motif
Other DBs
NCBI-ProteinID:
QPM74885
UniProt:
A0A7T1AZB3
LinkDB
All DBs
Position
complement(2259034..2262585)
Genome browser
AA seq
1183 aa
AA seq
DB search
MAGQFVQYGRHRKRRNYARISEVLELPNLIEIQTKSYEWFLEEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDTTYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNEKLDKNGRTNYDATIIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGFSTDQEIIDLLGDNEYLRNTLEKDGTENTDQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNAETG
EIVAEEGTVLDRRKIDEIMDVLESNANSEVYELEGTVIDEPVEIQSIKVYVPNDEEGRKT
TVIGNAFPDSEVKCITPADIIASMSYFFNLLSGIGFTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDLETNSITEQIDYLTADEEDSYVVAQANSKLDENGRFLDDEVVCRFRGNNT
VMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPFVGTG
MEHVAARDSGAAIIAKHKGRVEHVESNEILVRRLIEEDGKEYEGELDRYPLSKFKRSNTG
TCYNQRPIVAAGNVVTKGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSDSALKNLDDRGIVYVGAEVNDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDT
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDEDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENITKPSVPESFRVLMKELQSLGL
DVKIMDEHDNEIDMHDNEDEDAAERKVDLQQKDAPESQKEITD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtcaatttgtccaatatggaagacatcgtaaacgtagaaactacgctagaatt
tcagaggtattagaattaccgaacttaatcgaaatccaaactaaatcatatgaatggttt
ttagaagaaggattactagaaatgttccgcgacatttcaccaattgaagatttcactgga
aatctatcattagagtttgttgattatagacttggtgaaccgaaatacgatttagaagaa
tcaaaaaaccgtgatacaacttatgcggcaccactacgcgtcaaagttcgtttaatcatt
aaagaaactggcgaagtgaaagaacaagaagtatttatgggtgatttcccattaatgaca
gacacaggtactttcgtaattaatggtgctgaacgtgttatcgtatctcaattagttcgt
tcaccatccgtttatttcaatgaaaaattagataaaaatggtcgtacaaactatgatgca
acaattattccaaaccgtggtgcatggttagaatatgaaacagatgcaaaagacgttgtg
tacgtgcgtattgacagaacaagaaaattacctttaacagttcttttaagagcgttaggt
ttctcaacagaccaagaaatcattgatttacttggcgataatgaatatttacgtaacaca
ctagaaaaagatggtacagaaaataccgatcaagctttattagaaatttatgaacgttta
cgtcctggcgagccgcctacagtagaaaatgcgaaaagcttattatactctcgtttcttc
gatccgaaacgttatgatttagcaagtgtaggtcgttataaagcaaacaaaaaattacat
ttaaaacatcgtttattcaatcaaaaattagctgaaccaatcgttaatgctgagactggt
gaaatagtagctgaagaaggcactgttttagaccgtcgtaaaattgatgaaatcatggat
gttttagaatctaatgcaaacagcgaagtttatgaattagaaggcactgtaattgatgaa
cctgttgaaatccaatctattaaagtttatgttcctaacgatgaagaaggacgtaaaacg
acagtaattggtaatgcattccctgattcagaggttaaatgtataacaccagcagacatc
attgcttcaatgtcttacttctttaatttattaagtggcattggtttcactgatgatatt
gaccatttaggtaaccgtcgtctacgttcagtaggtgaattgttacaaaaccaattccgt
attggtttatcaagaatggaacgtgttgtaagagaaagaatgtctattcaagacactgac
tcaatcacaccacaacaattaatcaatattcgtcctgttattgcttctattaaagaattc
tttggaagctctcaattatcacaattcatggaccaagctaacccattagctgagttgacg
cataaacgtcgtctatctgcgcttggacctggtggtttaactcgtgaacgtgctcaaatg
gaagtacgtgacgttcactattcacactatggtcgtatgtgtccaatcgaaacgccagag
ggtccaaacattggacttatcaactcattatcaagttatgcacgtgttaatgaatttggc
tttatcgaaacaccataccgtaaagttgacttagagactaactcaatcacagaacaaatt
gactatttaacagctgatgaagaagatagctatgtggtagcacaagcgaactctaaatta
gatgaaaatggtcgtttcttagacgatgaagtagtttgtcgtttccgtggtaacaacact
gtgatggcgaaagaaaaaatggactacatggacgtatcaccaaaacaagtagtttcagct
gcgacagcatgtattcctttcttagaaaacgatgactctaaccgtgccttaatgggtgcg
aacatgcaacgtcaagcagtaccattgatgaaccctgaatcaccattcgttggtactggt
atggaacacgttgccgctcgtgactctggtgctgcaattatcgctaagcacaaaggtcgc
gttgagcacgttgaatctaatgaaattttagtacgtcgcttaattgaagaagacggcaaa
gaatacgaaggcgaattagatcgctatccattatctaaattcaaacgttctaacactggt
acttgttacaaccaaagaccaatcgttgcagcaggtaatgttgtaactaaaggcgaaatc
ttagcagatggaccttctatggaactaggcgaaatggcattaggtcgtaatgtcgttgtt
ggtttcatgacttgggacggttataactatgaagatgctgtaattatgagtgaacgcctt
gttaaagatgacgtatatacttctattcatattgaagaatacgaatctgaagcgcgtgac
actaaattagggcctgaagaaatcacaagagatattcctaatgtttctgatagtgcattg
aaaaacttagatgatcgaggcattgtttacgttggagctgaagttaatgatggtgacatc
ttagtaggtaaagtaacgcctaaaggtgtaactgaattgactgctgaagaacgtctatta
cacgcaatctttggtgaaaaagcaagagaagttcgtgatacttcattacgtgtacctcat
ggtgcaggcggtatcgtacttgatgttaaagtatttaaccgtgaagaaggagacgatact
ttatctccaggcgtaaaccaattagtacgtgtatatattgttcaaaaacgtaaaattcat
gttggtgacaaaatgtgtggtcgtcacggtaacaaaggtgtaatttctaaaatagttcct
gaagaggacatgccttatttaccggacggtacgccaattgacatcatgttaaacccatta
ggtgtaccatcacgtatgaacatcggacaagtacttgaactacacttaggtatggctgct
aaaaatctaggcattcatgttgcatcaccagtatttgatggtgctaacgatgaagatgtt
tggtctacgattgaagaagcaggcatggctagagatggtaaaactgtactttatgatggt
cgtactggtgaaccattcgacaaccgtatttcagttggtgtaatgtacatgcttaaactt
gctcacatggttgatgacaagttacatgcgcgttcaactggaccatattcacttgtaacg
caacaaccacttggcggtaaagctcaatttggtggacaacgtttcggtgaaatggaagta
tgggcacttgaagcttacggtgctgcttatacgttacaagaaatcttaacttataaatct
gacgatacagttggtcgtgttaaaacttacgaatcaatcgttaaaggtgaaaatatcact
aaaccaagtgttcctgaatcattccgcgtattgatgaaagaattacaaagtttaggatta
gacgttaagattatggatgaacatgataatgaaattgacatgcatgataacgaagatgaa
gatgctgcagagcgcaaagttgatttacaacagaaagatgcgccagaatctcaaaaagaa
atcactgactaa
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