Stenotrophomonas sp. LM091: BIZ42_00930 Help Entry BIZ42_00930       CDS       T04630                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism slm  Stenotrophomonas sp. LM091 Brite KEGG Orthology (KO) [BR:slm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:slm03400]     BIZ42_00930 Enzymes [BR:slm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BIZ42_00930     5.6.2.6  RNA 3'-5' helicase      BIZ42_00930 DNA repair and recombination proteins [BR:slm03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     BIZ42_00930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 PhoH AAA_25 Motif Other DBs NCBI-ProteinID:  AOX60893 LinkDB All DBs Position complement(214842..219590) Genome browser AA seq 1582 aa AA seqDB search MRTSNDLPGSLATFTPATRAWFTAAFTAPTPAQDRAWAAISAGQHTLVIAPTGSGKTLAA FLHAIDQLFRSGEPSSVPPSDPAPPKKRGTRVLYLSPIKALGADVQRNLQIPLQGVSAER ERRGDPAVNLSVAIRSGDTTAAERARLVRRPPDILITTPESLFLMLTSQARETLRDVHTV IIDEIHAVAGSKRGTHLALSLERLEALLAVPAQRIGLSATVRPVEEVARFLGGDRPVSVV HPPSQRALDVRIVVPVEDMADLPPHPGASEASPSSGRLGSIWPHVEASILDQVLARRSTI VFANARGVAEKLTARLNELYAERLAQRPTQAPAAEHHGSFTGGTAARSAGAEPLIARSHH GSVSKEQRREIEQALKSGELRCVVATSSLELGIDMGLVDLVIQVAAPPSVASALQRVGRA SHQVGGISTGLVYPRTRRDLIDATVAVERMLAGDIEAIDPPRNPLDVLAQQTVAAAAMDT LQVEAWFACVRRAAPYRSLPRSAFDATLDMLAGRYPSDDFAGFRPRLVWNRDTGELSARP GSKQLAVTSGGTIPDRGMFSVMLPEGEERAGSRRVGELDEEMVHESRVNDVITLGATSWR IEQITHDQVVVTPAPGRSARLPFWRGEGVGRPAELGEAVGAFIGALEGAVGEGDVSPALR ARLQADGLADNAVANIVGLLGEQREATGLLPTDRTLVVERCRDESGDWRLMLHSPYGRRV HDPWALAMAARIRERWGIDPAVVASDDGIIARLPDAAGRLPGAELFLFEPERLRSEVTRA VGGSALFAARFRECAARALLLPRRTPGRRSPLWQQRLRAGELFGIAQGYPEFPILIETAR ECLQDVYDLDALDGLMQRLADGRVAMAEVTTEVPSPFAANLLFGYVAEFMYGTDVPLAER RASVLSLDSGLLGDLLGQVDLGELLDPTVVDAMGEALQRRAPDRRAKGKEGVADLLRELG PLTAAALAARLIDAEPLPLLQALERERRAIRIPIAGVEHWAAIEDAARLRDALGVAMAAD LPDAFLQPAADPLGELLARYARSHPPFTTADAAAAFGLGVAVADAALTRLEMQGKLLKGA FGVVRRQSEGAGAMPAPVPLARHEWVSEDVFRRLRVRSLQAAREATRPVPREAYALLVLE RHGLIADAAQAARGMQTPARSALEGIDGVARVVELLAGVPLPASVWEQQILPARVVDYAP GLLDELLATGTVLWSGHGRIGEDDGLVALHLQELAAETLPALPPNAELSPLQAGILQVLA DGGAYFARQLAAAVRSQWEQAGTASPEITPDQLQSALWDLAWSGQVTTDLWAPLRALSGT RPPRPRVARTSRRSRGFRGIPMHDMPAVSEGAPPGTASFAAPTLAGRWSLLQREAVSDTV RAVALAEGLLDRHGIVTRGAAVAEGIAGGFPALQQVYRGMEDTGRVLRGRFVEGLGGAQF ADRLLVDRLRGIAEALRPGAADIAVGLSAVDPANPFGTVLPWPAHRTGQRPVRRAGAFVV IGGGRLLMYLAQGGRNLQVYVEADDPSLGAASQALASALRRGRRSSFTLELINDAVVKRD ALMDALRAAGFSSAPKGVSWEG NT seq 4749 nt NT seq  +upstreamnt  +downstreamnt atgcgcacctcgaacgatctccccggctcgctggccaccttcaccccggccacgcgcgcc tggttcaccgcggcgttcaccgcgcccacgccggcgcaggaccgcgcctgggccgcgatc agcgccggccagcacacgctggtgatcgcgccgaccggttcgggcaagaccctggcggcg ttcctgcacgcgatcgaccagttgttccgcagcggcgagccatccagcgttccgccctcc gatccagcgccgccgaagaagcgcggcacccgcgtgctgtacctgtcgccgatcaaggca ctcggcgccgacgtgcagcgcaacctgcagattcccttgcagggggtcagcgccgagcgt gagcggcgcggcgatccggcggtcaacctgtccgtggcgatccgcagcggggataccacg gccgccgaacgggcgcggctggtccggcgcccgcccgacatcctgatcaccacgcccgaa tcgttgttcctgatgctgacctcgcaggcgcgcgaaacactgcgcgacgtgcataccgtg atcatcgatgagatccatgcggtggccggcagcaagcgcggcacccatctggcgctgagc ttggaacggctggaggcgctgctggcggtgccggcgcagcgcatcggtctctctgccaca gtgcggccggtcgaggaggttgcgcggttcctcgggggcgaccgtccggtcagcgtggtc catccgccgtcgcaacgggcattggatgtgcgcatcgtcgtgccggtggaggacatggcc gacctgccgccccatcccggcgcatcggaggcttcgccgtcgtccgggcgtctggggtcg atctggccgcacgtggaggccagcattctcgatcaggtgctggcccggcgctccaccatc gtgttcgccaacgcgcgcggggtggccgagaagctgacggcgcggctcaacgagctgtac gccgagcgcctcgcgcagcggccaacgcaggctccggcggcagagcaccatggttccttc actggcggcaccgccgcgcgctcggccggggcggagccgctgatcgcacgttcacaccat ggctcggtgtccaaagagcagcgccgcgagatcgaacaggcgctcaaatccggtgagctg cgctgcgtggtcgccacctccagcctggagctggggatcgacatgggtctggtcgatctg gtcatccaggtcgccgcgccgccttcggtggccagcgcactgcagcgggtcgggcgcgcc agccaccaggtgggcggcatctccaccggcctggtctacccacgcacccgccgcgatctg atcgatgcgacggtcgcggtggagcgcatgctcgccggcgatatcgaggcgatcgaccct ccgcgcaatccgctggacgtgctggcccagcagaccgtggccgccgcggcgatggatacg ctgcaggtggaggcgtggtttgcctgtgtgcgtcgcgcggcgccgtaccggtcgctgcca cgcagcgccttcgatgccacgctggacatgctggccgggcgctacccgtccgatgatttt gccgggttccgcccacggctggtctggaaccgtgacaccggtgagctgagcgcccggccc ggatcgaagcagctggccgtcaccagcggcggcaccattcccgaccgcggcatgttcagc gtgatgctgcctgagggcgaggaacgcgcgggctcgcgtcgggttggcgagctggacgag gaaatggtccatgagtcgcgcgtcaacgatgtgatcacgctcggcgcgacgtcgtggcgc atcgaacagatcacccatgaccaggtggtggtgaccccggcaccgggccgctcggcgcgg ctgccgttctggcggggcgaaggcgtggggcgcccggccgagctgggcgaagcggtcggt gccttcatcggggcgctggaaggcgcggtcggcgagggcgacgtttcccccgcgctgcgg gcgcggctgcaggccgatgggttggccgacaacgcggtcgccaacatcgtcggcctgctg ggcgaacaacgtgaggccaccggcctgctacccaccgatcgcaccctggtggtggaacgt tgccgcgacgaatccggcgactggcggttgatgcttcattcgccgtatggccggcgcgtg catgacccgtgggcgctggcgatggccgcgcgcatccgcgagcgctggggcatcgatccg gcggtggtggccagtgatgacggcatcatcgcgcggctgcccgacgctgccggccgcctg cccggggcggagctgttcctgttcgagccggagcggctgcgcagcgaggtgacccgtgcg gtgggcggctcggccttgttcgccgcccgcttccgcgagtgcgcggcgcgcgcgctgttg ctgccgcggcgcacgccgggccgccgctccccgctgtggcagcagcgcctgcgcgcgggc gagctgttcggtatcgcgcagggctaccccgaatttccgatcctgatcgaaaccgcgcgc gaatgcctgcaggacgtctacgatctggacgcactggatgggttgatgcagcggctggcc gatgggcgcgtggcgatggccgaggtcaccaccgaggtgccatcaccgttcgcggcgaac ctgctgttcggctatgtcgccgagttcatgtacggcaccgacgtgccgctggccgagcgc cgcgcgtcggtgctctcgctcgacagcggcctgctgggggatctgctcggccaggtcgat ctgggcgaactgctcgatcccaccgtggtcgacgcgatgggcgaggcgctgcagcggcgc gcgccggatcgccgcgccaagggcaaggagggcgttgccgatctgctgcgcgagctgggc ccgctcacggcggctgcgctggccgcgcgcctcatcgacgccgagccgctgccgctgctc caggcattggagcgggagcgccgcgcgatccggattccgatcgccggggtcgaacactgg gccgccatcgaagatgccgcacgcctgcgcgacgcactcggtgtcgctatggcggcggac ctgcccgacgcattcctgcagcccgctgccgatccgttgggcgagttgctggcgcgctat gcccgcagccatccgccgttcaccaccgccgacgcagcagcggcgttcgggctgggcgtg gccgtggccgatgccgcgctgacccggctggagatgcagggcaagctgctgaagggcgcg ttcggcgttgtccgccggcagtcggaaggtgccggcgcgatgccggcgccggtgccattg gcccgtcacgaatgggtaagcgaggacgtgttccggcggttgcgggtgcgctcgctgcag gccgcgcgcgaggccacccggccggtgccccgcgaggcttacgcattgctggtgctggaa cggcatggcctgatcgccgatgccgcccaggccgcccgtggcatgcagaccccggcccgc agtgcgctggagggcatcgacggcgtggcacgggtcgtggaactgctggccggcgtgccg ctgcccgcctcggtatgggagcagcagatattgcccgcgcgggtggtggactacgcgccc ggactgctggacgaactgctcgcgaccggcacggtgttgtggtcaggccatggccgcatc ggcgaggacgacggcctggtcgcgctgcacctgcaggaactggccgccgagaccctgccg gcactcccgcccaacgcagagctctccccgttgcaggccggcatcctgcaggtgctggcc gacggcggtgcgtacttcgcccgccaactggccgcggccgtgcgcagccagtgggagcag gccggcacggccagcccggagatcaccccggaccagctgcagagtgccctgtgggacctg gcctggtcgggccaggtgaccaccgacctatgggcgccgctgcgcgcactgtccggcacg cgcccgccacgcccccgcgtagccaggacgtcgcggcgcagccgcggtttccgcggcatc ccgatgcacgatatgcccgccgtcagtgaaggtgcgccgccgggcaccgccagcttcgcg gcgccgacgctggccggtcgctggtcgctgctgcaacgggaggcggtgagtgacaccgtg cgtgcggtggccctggccgagggcctgctggatcgccacggcatcgtgacccgtggcgcg gccgtcgcggaagggattgccggcggcttcccggcgttgcagcaggtctatcgtgggatg gaggacaccggccgcgtgctgcgcgggcgtttcgtggaggggctgggcggggcgcagttc gctgaccgcctgctggtggaccgcctgcgcgggattgccgaagcgctgcggccgggggct gccgacatcgcggtcggcctgtccgcggtggacccggccaatccgttcggtacggtgctg ccgtggccagcgcatcgcacggggcagcgtccggtgcggcgggctggcgcgttcgtggtg atcggtggtgggcgcctgctgatgtatctggcccagggggggcgcaacctgcaggtgtat gtcgaggcggatgatccgtcgcttggcgcggcctcgcaggcactggccagtgcgctcagg cgtggccggcgcagttccttcaccctggagctgatcaacgacgcggtggtgaagcgcgac gccttgatggatgccctgcgtgccgcgggtttttccagtgcgcccaagggcgtgagctgg gaagggtaa

DBGET integrated database retrieval system