Stenotrophomonas sp. LM091: BIZ42_01920
Help
Entry
BIZ42_01920 CDS
T04630
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slm02000
]
BIZ42_01920
Transporters [BR:
slm02000
]
Other transporters
Pores ion channels [TC:
1
]
BIZ42_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AOX61056
LinkDB
All DBs
Position
432186..434324
Genome browser
AA seq
712 aa
AA seq
DB search
MTRPSLRLSALGLPLTFACLSAHAAPPSSPDVQQLDAVQVLGRAQTLYRVDDATVGTRTD
TPLALVPQSIQVVPRELIEDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLR
GDPYAGFSVPQLFNIERVEVLKGPAGALYGGGDAGGVINYVTRKPKATPERRIELQAGNN
DFRAASIEATGPMNAAGSVRYRAGLYGDTEQGVRWNADSESVIGDASLAFDVGDTGELTL
QFTDITQNLGGNRLRGVPVDDNGSFLTDRRWNHNEATDFLDMRAKVALAQYRFSPSTNLD
VDVGARWFENNEHQIYHEPMGLIDRNRDGVPEWMTRQLRNQIRDNDAFTANANAVWRVST
GRIEHKVLFGADVYQQDADFTAQTANSADLARGAGPVPGIDLFNPVYGASSWRDYNLAAL
PWRSTSTRSKRYGGYLQDELTLTPRWHVLAGLRWDGFKDDDRIAGTAVDGNDISWRLGST
YTVREGVNFYANIASGFMPQSAANQSAEAGGPFDAERSRQWEVGLKSLLAERITLNLAAY
RIDRSNIVQATGEIVDGVNQLAALGLVRSTGMELDLLADVTDRWVLNLTYAYNDARVKDA
GSNGITNASGDRFANAPQNKLGLWTRYDLPAIHSAIGFGADYVDERVSLDGQRVKPYTVF
DMSWKTQWQQWQFQANVKNLFDKVYAASGFSERTGHFPGEPRRVYVQAAYAF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccgtcgcttcgtctctctgccctgggcttgcccctgaccttcgcctgcctt
tcggcacatgccgctccgccctcctcccccgatgtgcaacagctcgacgcagtccaggtc
ctcggccgcgcccagaccctctaccgggtcgacgacgccacggtgggcacgcggacggat
acgccgctggcgctggtgccgcagtccatccaggtggtgccgcgtgagctgatcgaagac
caggcggcccgccagatcaccgacctgtaccgcagcatcagcggcatcagcttcttcagc
tacgccggcgtgaccctgcgcggcttccgccaggaaaacgtgctgtatgacggcctgcgc
ggcgacccctatgccggtttttcggtcccgcagctgttcaacatcgagcgcgtggaggtc
ctgaagggaccggccggcgccctgtacggcggcggtgatgccggcggcgtcatcaactac
gtgacgcgcaagccgaaagccacgcccgagcgccgcatcgaactgcaggccggcaacaac
gatttccgggctgcatcgatcgaggccaccgggccgatgaacgccgctggcagcgtgcgc
taccgcgccgggctgtatggcgacaccgagcagggcgtgcgttggaacgcagacagcgaa
agcgtgatcggtgatgcgtcgctcgccttcgacgtaggcgacaccggcgagttgaccctg
cagttcaccgacatcacccagaacctgggcggcaaccgcctgcgcggcgtgccggtggac
gacaacggcagctttctcaccgaccggcgctggaaccacaacgaagccaccgacttcctc
gacatgcgcgccaaggtggcgctggcgcagtaccgcttctcgcccagcaccaacctggac
gtggatgtgggtgcgcgctggttcgagaacaacgagcaccagatctaccacgagccgatg
gggctgatcgaccgcaaccgcgacggcgtgcctgaatggatgacccgccagctgcgcaac
cagatccgcgacaacgatgccttcaccgccaacgccaacgcagtgtggcgtgtcagcacc
ggccgcatcgagcacaaggtgctgtttggcgccgatgtgtaccagcaggatgccgacttc
accgcgcagacggccaacagcgcggacctggcgcggggtgccggcccggtgccgggcatc
gacctgttcaacccggtgtatggcgcaagttcgtggcgcgactacaacctggccgccctg
ccctggcggagcaccagcacgcgcagcaagcgctatggcggctacctccaggacgaactg
acgctgaccccgcgctggcatgtgctggccggactgcgctgggacgggttcaaggacgat
gaccgcattgccggcaccgcggtggatggcaacgacatcagctggcggctgggcagcacg
tacaccgtgcgggaaggcgtcaatttctacgccaacatcgccagcggcttcatgccccag
agcgcggccaaccagagcgccgaggcgggcggcccgttcgatgccgagcgcagcagacaa
tgggaagtcgggttgaaatccctgctggccgagcgcatcaccttgaacctggccgcgtac
cggatcgaccgcagcaatatcgtgcaggccaccggtgagatcgtggacggcgtcaaccaa
ctggccgccctgggcctggtgcgcagtacgggcatggagctggacctgctggccgatgtc
accgaccgctgggtgctcaacctcacctacgcctacaacgatgcgcgggtgaaagatgcc
ggcagcaacggcatcaccaatgcgtccggcgatcgcttcgccaatgcgccgcagaacaag
ctcggcctgtggacacgctacgacctgccggcaatccattcggccatcggtttcggcgcc
gattacgtggatgagcgcgtcagcctggatggccaacgggtgaagccgtacaccgtgttc
gacatgagctggaagacccaatggcagcagtggcagttccaggccaacgtcaaaaacctg
ttcgacaaggtgtacgccgccagcggcttcagcgagcgcaccggccacttcccgggtgag
ccgcgccgtgtgtacgtgcaagctgcgtacgccttctga
DBGET
integrated database retrieval system
