Stenotrophomonas sp. LM091: BIZ42_03630
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Entry
BIZ42_03630 CDS
T04630
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BIZ42_03630
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slm01007
]
BIZ42_03630
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slm03016
]
BIZ42_03630
Enzymes [BR:
slm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BIZ42_03630
Amino acid related enzymes [BR:
slm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BIZ42_03630
Transfer RNA biogenesis [BR:
slm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BIZ42_03630
Prokaryotic type
BIZ42_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AOX61360
LinkDB
All DBs
Position
complement(808288..810669)
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AA seq
793 aa
AA seq
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MKFSENWLRSHVPTTVSRDELSAVLTAIGLEVEEVDALGDGLQHVVVAKIISAERHPEAD
RLQICQVDAGQGEHLQIVCGAPNARPGLVAPLAMVGAQIGELKIKPAKLRGVESNGMLCS
AKELGLDTDASGLFELPDDAPVGQTLVEYLGLPDASIEIKLTPNRADCFSIRGIAFDVAA
ACASEVVPFDAAPVAAVGTRELSIQLDAGAEAPRYVGRVIEGVNAHAATPLWMAERLRRS
GVRPVSLLVDVTQYVMLELGQPMHAFDLGTLQGSIGVRRSRAGETLKLLDGRDAALDDSF
LLVTDADRPIALAGLMGGFDTRVTDDTTNVFLEAAHFAPAAIMGRGRKLGLHTDAGHRFE
RGVDPVLPRAAIEYATRLILDLAGGTPAPVTEAVRDADLPATATIGLRRARIARVLGIQI
ADADVERILRALGMDVTATADGWQVTAPSRRFDIAIEEDLIEELARIHGYEQIPTTLPGG
ASRIAMPTETRLDDLSVRRQLVARDLQETINYAFVDAALLAQWQLSEGLVALANPLSAEL
AVMRPSLLPGLVATLGRNAARQLGRVRLFELGRVFHQQAGEGQPAPLETQRVAAAICGDA
DTQQWGLPTRKVDFHDLKGDLESLAAASGAELEFRPSQRPYGHPARSAEVYRDGVSLGWI
GQIHPRLAKAMDIDVDVVAFELDLAPLAARALPRATELSRFPSMRRDLAFLVPEAAAWAD
LEATLRRAAGPLLREVTLFDRYVGQGVEPGFKSLAMGLILQDKSRTLTDRDVDAVVAEAV
SAMEREHHARIRG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctctgaaaactggctgcgcagccacgtcccgaccaccgtctcgcgcgatgaa
ctcagcgcggtgctgaccgcgatcggtctggaagtggaagaggtcgatgcgctgggcgat
ggcctgcagcatgtggtcgtggcgaagatcatttccgccgaacgccatcccgaagccgac
cgcctgcagatctgccaggtcgatgcggggcagggcgagcacctgcagatcgtgtgcggt
gcgccgaacgcgcgcccgggcctggtcgcaccgctggcaatggtaggcgcgcagatcggc
gagctgaagatcaagccggccaagctgcgcggcgtggaatccaacggcatgctgtgctcg
gccaaggagctgggcctggacaccgatgcgtccggcctgttcgaactgcccgacgatgcc
cccgttggccagaccctggtcgagtacctcggcctgcccgacgccagcatcgagatcaag
ctgaccccgaaccgcgccgactgcttcagcatccgcggcatcgccttcgacgtggccgct
gcgtgcgccagtgaagtggtgccgttcgacgctgcgccggtggccgccgtgggcacgcgt
gaactgtccatccagctggacgctggcgccgaagcgccgcgttacgttggtcgcgtgatc
gagggcgtcaacgcccatgccgcgaccccgctgtggatggccgagcgcctgcgccgcagt
ggcgtgcgcccggtgtcgctgctggtggacgtcacccagtacgtcatgctggaactcggc
cagccgatgcatgccttcgatctgggcaccctgcagggcagcatcggcgtgcgtcgttcg
cgtgccggtgagaccctgaagctgctcgatggtcgcgacgccgcgctggacgacagcttc
ctgctggtcaccgatgccgaccgcccgatcgcgctggccggcctgatgggcggcttcgat
acgcgcgtcaccgacgacaccaccaacgtgttcctggaggccgcgcacttcgcgcccgcc
gcgatcatgggccgtggccgcaagctgggcctgcacaccgatgccggccaccgcttcgag
cgtggcgtcgacccggtgctgccgcgcgcggcgatcgagtacgccacgcgcctgatcctg
gacctggctggcggcacgccggcgccggtcaccgaggccgtgcgcgacgccgatctgccg
gcgaccgccaccatcggcctgcgccgcgcccgtatcgcgcgcgtgctgggcatccagatc
gccgatgccgatgtggagcgcatcctgcgtgcgctgggcatggacgtgaccgcgaccgcc
gatggctggcaggtcaccgcgccgagccgccgtttcgatatcgccatcgaagaagacctg
atcgaagagctggcccgcatccacgggtacgagcagattccgaccacgctgccgggcggc
gcctcgcgcatcgccatgccgaccgagacccgcctggacgacctgagcgtgcgccgccag
ctggtggcccgtgacctgcaggaaaccatcaattacgccttcgtcgatgccgcgctgctc
gcacagtggcagctgagcgaggggctggtcgcgctggccaacccgctgtcggccgaactg
gcggtgatgcgcccgtcgctgctgccgggcctggtcgccaccctgggccgcaacgccgcc
cgccagctgggccgcgtgcgcctgttcgaactggggcgcgtgtttcaccagcaggctggc
gagggccagcccgcgccgctggaaacccagcgcgtggctgccgcgatctgtggcgatgcc
gacacccagcaatggggcctgccgacccgcaaggtcgacttccatgacctcaagggcgac
ctggaatcgctggccgctgccagcggcgccgagctcgagttcaggccctcgcagcgtccg
tacggccacccggcacgctcggccgaggtctaccgtgacggcgtgagcctgggctggatc
ggccagatccacccgcgcctggccaaggccatggatatcgacgtggacgtggtcgccttc
gaactcgacctggccccgctggccgcccgcgccctgccgcgcgccaccgagctgtcgcgc
ttcccgtcgatgcgccgcgacctggccttcctggtgcccgaggccgccgcctgggccgac
ctggaagccaccctgcgccgggctgccggcccgctgctgcgcgaggtcacgctgttcgac
cggtacgtcggccagggggtcgagccgggcttcaagagtctcgctatgggcttgattttg
caggacaagtcgcgcactctgacggaccgcgacgtggatgcggtggtggccgaggcggtc
tctgccatggagcgtgaacatcacgcccggatccgcggttga
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