Stenotrophomonas sp. LM091: BIZ42_03705
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Entry
BIZ42_03705 CDS
T04630
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slm03016
]
BIZ42_03705
Enzymes [BR:
slm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BIZ42_03705
Transfer RNA biogenesis [BR:
slm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BIZ42_03705
Prokaryotic type
BIZ42_03705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AOX61374
LinkDB
All DBs
Position
complement(825600..826511)
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AA seq
303 aa
AA seq
DB search
MAPRISFRRLDGILLLDKPTGMSSNAALQVARRLYRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEVVLGQTTDTDDSDGAVLRERPVPAISAAELEAALAPLRGPIR
QRAPIYSALKQGGEPLYLKARRGEAIEAPERDVEVHALEVLDQQPTRLSLRVTCGSGTYI
RSLARDLGETLGCGAHIAGLRRLWVDPFREAPMVTLETLRGLAEQGDEAGMEALLLPLDA
GLAHYPRITLNEEQTPRFRVGQRIRDGGWPQGGVVVFGPGEAIQGLGQVDETGLLAPQRL
FNL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccgaatttcgttccgtcgcctggatggcatcctgctgctcgacaagccgacc
ggcatgagctccaacgcagccttgcaggtggcacgccgtctgtaccgcgccgagaagggc
ggccacaccggcagcctggatccgctggcgaccggcctgctgccactgtgctttggtgaa
gccaccaagatcgccggtctgctgctgggctcggccaaggcctatgacgccgaggtggtg
ctgggccagaccaccgataccgatgattccgatggtgcggtactgcgcgagcggccggtg
ccggccatcagcgcggccgaactggaggcggcgctggcaccgctgcgcggccccatccgc
cagcgcgcgccgatctactccgcgctcaagcagggcggcgagccgctgtatctgaaggcg
cgccgcggtgaggccatcgaggcccccgaacgcgacgtggaggtccacgccctggaggtg
ctggaccagcagccgacccgtctgtcgctgcgggtgacctgcggttcaggcacttacatc
cgcagcctggcccgcgatctgggcgagaccctgggctgcggcgcccatatcgccggcctg
cgccggctgtgggtggatcccttccgtgaggcgccgatggtcaccctggagaccctgcgc
ggcctggccgagcagggcgatgaggccggcatggaggccctgctgctgccgctggacgcg
ggtctggcgcattacccccggatcacgctgaacgaggagcagacccctcgcttccgcgtg
ggccagcgcatccgcgatggcggctggccgcagggtggggtggtcgtgttcgggccgggc
gaggcgatccagggcctggggcaggtcgacgagaccggtctgctggccccgcagcgcctg
ttcaacctctga
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