Stenotrophomonas sp. LM091: BIZ42_03940
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Entry
BIZ42_03940 CDS
T04630
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slm03009
]
BIZ42_03940 (rimO)
Enzymes [BR:
slm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BIZ42_03940 (rimO)
Ribosome biogenesis [BR:
slm03009
]
Prokaryotic type
ribosomal protein modification factors
BIZ42_03940 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOX61414
LinkDB
All DBs
Position
complement(874103..875467)
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AA seq
454 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYMSVMEAVHAALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHKCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDVKYAERMWRDKAYQTRLKALCEGLSELDAWTRMHYVYPYPH
VDEIVPLMAENRILPYLDIPFQHASPRILKLMKRPGAVDKTLERVQRWRQLCPDITVRST
FIVGFPGETDAEFEELLSFLDEAQLDRVGAFAYSPVTGATANDLPGAVPEEVKQERLARF
MERQAEISAARLEAKIGTVQQCLVDAIEDGIAVARSKADAPEIDGLVHIQNAEEARLRVG
QFVDVEITESDDHDLFGDAILAAEARKPFDLHVL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcccttgtc
gattccgagcgcatcctgacccagctgcggtccgagggctacgacatcgttccctcttat
gactcggccgatgtggtggtggtcaacacctgcggcttcatcgattcggccgtgaccgag
tcgctggatgcgatcggcgaggcgatgaacgccaacggcaaggtgatcgtcaccggttgc
ctgggcaaacgcccggagcagatccgcgaggcctacccgaacgtgctggcggtgtccggt
ccgcaggactacatgagcgtgatggaggccgtgcacgccgcgctgccgcccaagcacgat
cccttcgtggatctggtgcccgattacggcatcaagctgaccccgcgccattacgcgtac
ctgaagatttccgaaggctgcaaccacaagtgcagcttctgcatcatcccctcgatgcgc
ggcaagctggtctcgcgcccggtggatgaggtgctgcgcgaagccgagcggctggtgcgt
ggtggcgtcaaggaactgctggtggtgtcccaggacacctcggcctatggcgtggacgtg
aagtacgccgagcgcatgtggcgcgacaaggcctaccagacccgcctgaaggcgctgtgc
gaaggcctttccgagctggatgcgtggacccgcatgcactacgtctacccgtacccgcac
gtggacgagatcgtgccgctgatggccgagaaccggatcctgccgtacctggatatcccg
ttccagcatgccagcccgcgcatcctcaagctgatgaagcgcccgggcgcggtcgacaag
acgctcgagcgtgtgcagcgctggcgccagctctgcccggacatcacggtgcgctcgacc
ttcatcgtcggcttccccggcgagaccgatgccgagttcgaggagctgctgagcttcctg
gacgaggcgcagctggaccgcgtcggtgcgttcgcttactcgccggtcaccggcgcgacc
gccaacgatctgcccggtgcggtgcccgaagaagtgaagcaggagcgcctggcccgcttc
atggagcgccaggcggagatttccgccgcgcgcctggaagccaagatcggcaccgtgcag
cagtgcctggtcgatgccatcgaagacggcatcgcggtggcccgttccaaggccgatgcg
ccggagatcgacggtctggtgcatatccagaacgcggaagaagccaggctgcgggtgggt
cagttcgtcgatgtggagatcaccgagagcgacgaccacgatctgttcggtgacgcgatc
ctcgccgccgaagcgcgcaagccgttcgatctgcacgtgctgtga
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