Stenotrophomonas sp. LM091: BIZ42_04090
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Entry
BIZ42_04090 CDS
T04630
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BIZ42_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_04090
Enzymes [BR:
slm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BIZ42_04090
DNA repair and recombination proteins [BR:
slm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BIZ42_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
MAD
DUF6687
ABC_tran_CTD
V-SNARE
KxDL
Motif
Other DBs
NCBI-ProteinID:
AOX61439
LinkDB
All DBs
Position
916162..916422
Genome browser
AA seq
86 aa
AA seq
DB search
MAKKSPNETSPVAHFEQSLEELEQLVEKMETGEMSLEQSLSAYERGVGLYRQCQQALEQA
ELRVRLLSDPAQPDTAVPFDPPSHDG
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagtcccccaatgaaacctccccggtcgcccacttcgagcagtcgctggaa
gagctggagcagctggtggagaagatggaaaccggcgaaatgagcctggaacaatcgctc
agcgcctacgaacgtggcgtcggcctgtaccgccagtgccagcaggcgctggaacaggcc
gaactgcgcgtgcgcctgctcagcgatccagcccagcccgacaccgcggtgccattcgac
ccgcccagccatgacggttga
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