Stenotrophomonas sp. LM091: BIZ42_04125
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Entry
BIZ42_04125 CDS
T04630
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slm03019
]
BIZ42_04125
03009 Ribosome biogenesis [BR:
slm03009
]
BIZ42_04125
Messenger RNA biogenesis [BR:
slm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BIZ42_04125
Ribosome biogenesis [BR:
slm03009
]
Prokaryotic type
rRNA processing factors
BIZ42_04125
SSDB
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Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
CHP02642
TLP1_add_C
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
AOX61446
LinkDB
All DBs
Position
complement(925369..926856)
Genome browser
AA seq
495 aa
AA seq
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MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
GLERAAFLHANDVIRPAPVASADTEGTTLPPPSSVPIVELLRDGQDIVVQVVKDPIGTKG
ARLTTQISIPSRYMVLLPQSKVVGVSARIEDEAERARLKTLVTELSAQHGGYGYIVRTNA
EGQPAEAIAEDVAYLSRVWNVVERRGRDAAPCSVIYEDLSLPLRSVRDLIRKDVDKVKVD
SKETFNQLQAFVAKYMPVLAEKLELYSGDRPIFDMFGVEDEIGRALDKQVPLKSGGYLVI
DQTEAMTTIDVNTGSFLGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDA
EHRRQVLRTLEKALARDHAKTTVYDFSPLGLVEMTRKRTVESLERQLSEPCPECSGRGSI
KTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESSAVAELEEFLGKSIRFQ
ADEQYLQEQFDVVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaatcctggtcaatgtcaccccgcgggaaacccgcgtcgccgtcatcgaa
aacggcatgctgcaggagctgcatatcgaacgcggctggcgccgtggcgtcgtcggcaac
atttataaaggcaaggtccagcgggtgatgcccggcatgcaggcggcgttcgtggaggtc
gggctggagcgcgccgcgttcctgcacgccaacgacgtgatccgcccggccccggtggcc
agcgccgataccgaaggcaccaccctgccgccgccgtcctcggtgccgatcgtggagttg
ctgcgcgacggccaggacatcgtggtgcaggtggtcaaggatccgatcgggaccaagggg
gcccggctgaccacgcagatcagcattccctcgcgctacatggtgctgctgccgcagtcc
aaggtggtgggcgtgtcggcccggatcgaagacgaggccgagcgcgcgcgcctgaagacc
ctggtgactgaactgtcggcccagcacggcggttatggctatatcgtgcgcaccaacgcc
gaaggccagccggccgaagcgatcgccgaggacgtggcctacctgtcgcgggtctggaac
gtggtcgagcgccgtggccgcgatgccgccccgtgcagcgtgatctatgaagacctgagc
ctgccgctgcgctcggtgcgcgacctgatccgcaaggacgtggacaaggtcaaggtcgac
tccaaggagaccttcaaccagttgcaggcattcgtggccaagtacatgccggtgctggcc
gagaagctggagctgtacagcggcgatcgcccgatcttcgacatgttcggggtcgaggac
gagatcggccgggcgctggacaagcaggtgccgctcaagtccggtggctatctggtgatc
gaccagaccgaggcgatgaccaccatcgacgtgaacaccggttcgttcctgggccagcgc
aatctcgaagagacggtgttccgcaccaatcttgaagcggcgcaggccgtggcgcgccaa
ctgcggctgcgcaacctgggcggcatcatcatcatcgacttcatcgacatggatgacgcc
gagcatcgccgccaggtgctgcgcacgctggagaaggcgctggcccgcgaccatgccaag
accaccgtctatgacttctcgccgctgggcctggtcgagatgacgcgcaagcgcaccgtg
gaaagcctggagcgccagctctccgagccgtgcccggagtgcagcgggcgggggtcgatc
aagaccgccgagacggtgacctatgagatcttccgcgagatcacccgggcggtgcgccag
ttcgatgcggcccgcctgctggtgatcgcctcctcgaaggtggtcgcgcgcatcaccgac
gaggaatcctcggcggtggccgaactggaggagttcctgggcaagagcatccgcttccag
gcggacgagcagtacctgcaggagcagttcgatgtcgtgctgctctga
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