KEGG   Stenotrophomonas sp. LM091: BIZ42_04480
Entry
BIZ42_04480       CDS       T04630                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
slm  Stenotrophomonas sp. LM091
Pathway
slm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:slm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BIZ42_04480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slm03019]
    BIZ42_04480
   03009 Ribosome biogenesis [BR:slm03009]
    BIZ42_04480
   03036 Chromosome and associated proteins [BR:slm03036]
    BIZ42_04480
Enzymes [BR:slm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BIZ42_04480
Messenger RNA biogenesis [BR:slm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BIZ42_04480
Ribosome biogenesis [BR:slm03009]
 Eukaryotic type
  90S particles
   RNase
    BIZ42_04480
 Prokaryotic type
  rRNA processing factors
   BIZ42_04480
Chromosome and associated proteins [BR:slm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BIZ42_04480
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: AOX61509
LinkDB
Position
complement(997021..997701)
AA seq 226 aa
MPTKTFQRGDLIGHAFNDPGLLQQALTHRSAGTPNNERLEFLGDSIVNMMVAQALYERWP
KADEGALTRARAELVREGALAVIARELHLGERLILGPGEMKTGGHRRDSILADALEAVVA
AIYLDAGFAACRTVVLPWFTASMHALPATGKPEKDPKTRLQEWLQARQKALPLYELVSES
GDDHAKTFRVRCGVTDPAVSTEGEGASRRLAEQQAAAAALEQLDSK
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgccgactaagaccttccaacgcggtgacctgatcggtcacgccttcaacgatccgggc
ctgctccagcaggcgctgacgcatcgcagtgccggcacgcccaacaatgagcggctggaa
ttcctcggcgacagcatcgtcaacatgatggtggcccaggcgctctacgaacgctggccc
aaggccgacgagggcgcgctgacccgcgcccgtgccgaactggtgcgcgagggcgcgctg
gcggtgatcgcgcgcgagctgcacctgggcgagcgcctgatcctgggcccgggcgagatg
aagaccggcggccatcgccgcgactccatcctggccgatgcgctggaagcggtcgtcgcc
gcgatttacctcgatgccggcttcgccgcctgccggaccgtggtgctgccctggttcacc
gcctcgatgcacgccctgccggccaccggcaagccggagaaagaccccaagacccggctg
caggaatggctgcaggcgcggcagaaggcattgcccctgtatgagctggtgtcagaatcg
ggtgacgatcacgccaagaccttccgggtacgctgcggcgtaaccgaccccgctgtcagc
accgaaggcgaaggtgcctcgcgacggctggccgaacaacaggcggctgccgccgccctc
gagcaactggattccaagtga

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