Stenotrophomonas sp. LM091: BIZ42_04515
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Entry
BIZ42_04515 CDS
T04630
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm00071
Fatty acid degradation
slm00280
Valine, leucine and isoleucine degradation
slm00310
Lysine degradation
slm00362
Benzoate degradation
slm00380
Tryptophan metabolism
slm00410
beta-Alanine metabolism
slm00640
Propanoate metabolism
slm00650
Butanoate metabolism
slm00907
Pinene, camphor and geraniol degradation
slm00930
Caprolactam degradation
slm01100
Metabolic pathways
slm01110
Biosynthesis of secondary metabolites
slm01120
Microbial metabolism in diverse environments
slm01200
Carbon metabolism
slm01212
Fatty acid metabolism
Module
slm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BIZ42_04515
00650 Butanoate metabolism
BIZ42_04515
09103 Lipid metabolism
00071 Fatty acid degradation
BIZ42_04515
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BIZ42_04515
00310 Lysine degradation
BIZ42_04515
00380 Tryptophan metabolism
BIZ42_04515
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BIZ42_04515
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BIZ42_04515
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BIZ42_04515
00930 Caprolactam degradation
BIZ42_04515
Enzymes [BR:
slm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BIZ42_04515
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BIZ42_04515
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BIZ42_04515
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Ortholog
Paralog
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
NPLP1_C
ApbA
MORN
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AOX61516
LinkDB
All DBs
Position
1004329..1006392
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AA seq
687 aa
AA seq
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MLSGFDGLRFSHWHPQIRDDGVVVLSLDRQDSSVNAMSQDVLLELGDLIERIAMDPPKAV
VIQSIKAAGFIAGADLKEFQAFDRRGTVNDAIRRGQSTYQKLAELPCPTVAAIHGHCLGG
GTELALACRYRVASNDPSTRIGLPETQLGIFPGWGGSSRLPQLVGAPAAMDMMLTGRNLS
ASAARNIGLVDKVVAPAVLLDTAVSLALKGTTRPFKQRATAWITNTWLARRLLAPQMAKQ
VARKARKEHYPAPYALINTWARTGGSPIQTRLDAERRAVVKLAGTPTARNLIRIFFLTER
LKALGGKDHGIQHVHVVGAGVMGGDIAAWSAYKGFNVTLQDREQRFIDPAMERAQALFAK
RVKDESKRPAVAARLKADLAGEGVALADLVIEAIIENPEAKRDLYQSLEPTMKADALLTT
NTSSIPLDELRDHIQRPAQFAGLHYFNPVAQMPLVEIIHHDGMAPETERRLASFCKALGK
FPVPVAGTPGFLVNRVLFPYMLEAATAYAEGVPGPVLDKAAVKFGMPMGPIELLDTVGLD
VAAGVGKELAPFLGLQVPAALATVEQGKRGKKDGQGLYKWENGRAQKPDVPANYEIPADL
EDRLILPLLNEAVACLHDGVVADADLLDAGVIFGTGFAPFRGGPIQYIRATGADVLVERL
KVLQQRYGGRFAPRPGWDSPVLREPVI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaggcttcgatgggctccgcttctcgcattggcacccgcagatccgtgacgat
ggcgtcgtggtgctcagcctcgaccgccaggacagcagcgtcaatgccatgtcgcaggac
gtgctgctcgaactgggcgacctgatcgagcggatcgcgatggacccgcccaaggcggtg
gtgatccagtcgatcaaggcggccggcttcatcgccggggcggacctgaaggaattccag
gcgttcgaccgccgcggcaccgtcaatgacgcgatccgccgtggccagagcacctaccag
aagctggccgaactgccctgcccgaccgtggcggcgatccatgggcattgcctgggcggc
ggcaccgagctggcgctggcctgccgttaccgcgtggcctccaatgatccgtccacccgg
atcggcctgccggaaacccagttgggcatcttcccgggctggggcggcagctcgcgcctg
ccgcagctggtcggcgcgccggcggcgatggacatgatgctgaccggccgcaatctgtcg
gcctcggccgcgcgcaacatcggcctggtcgacaaggtcgtcgcgcccgccgtgctgctc
gataccgcggtctcgctcgcactgaagggcaccacccgcccgttcaagcagcgcgcgacg
gcgtggatcaccaacacctggctggcgcgcaggctgctcgccccgcagatggccaagcag
gtcgcccgcaaggcgcgcaaggagcactacccggcgccgtacgcgctgatcaacacctgg
gcgcgcaccggtggcagcccgatccagacccgcctggatgccgagcgtcgcgcggtggtc
aagctggccggcacgccgaccgcacgcaacctgatccgcatcttcttcctgaccgaacgc
ctgaaggccctgggtggcaaggaccatggcatccagcacgtgcacgtggtcggtgccggc
gtgatggggggcgacatcgccgcgtggtcggcctacaagggcttcaacgtgaccctgcag
gatcgcgagcagcgcttcatcgatccggccatggaacgcgcgcaggcgctgttcgccaag
cgggtgaaggacgagagcaagcgcccggccgtggccgcgcggttgaaggccgatctcgcg
ggcgagggcgtggcgctggccgatctggtgatcgaagcgatcatcgagaatccggaagcg
aagcgtgatctgtaccagtcgctggagccgacgatgaaggccgatgcgctgctgaccacc
aacacctcctcgatcccgctggacgaactgcgcgaccacatccagcgcccggcgcagttt
gccggcctgcattacttcaacccggtcgcgcagatgccgctggtggaaatcatccaccac
gacggcatggccccggaaaccgagcgtcgcctggcgtcgttctgcaaggcactgggcaaa
ttcccggtgcccgtcgccggtacccctggcttcctggtcaaccgcgtgctgttcccgtac
atgctcgaagccgccaccgcctatgccgaaggcgtgcccgggccggtactggacaaggcc
gcggtcaagttcggcatgccgatgggcccgatcgaactgctcgataccgtcggtctggac
gtggccgcaggcgtgggcaaggaactggcgcccttcctcgggctgcaggtgccggctgcc
ctggcgacggtggaacagggcaagcgcggcaagaaggacgggcagggcctgtacaagtgg
gagaacggccgggcgcagaagccggacgtccccgccaactacgagatcccggccgatctg
gaagaccgcctgatcctgccgctgctcaacgaagcggtggcctgcctgcacgacggcgtg
gttgccgatgcggacctgctcgatgccggcgtgatcttcggcaccggcttcgccccgttc
cgcggtggcccgatccagtacatccgcgccaccggtgccgatgtgctggtcgaacgcctc
aaggtgctgcagcagcgctacggcggtcgcttcgccccgcgcccgggctgggactcgccg
gtactgcgtgagcccgtgatctga
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