Stenotrophomonas sp. LM091: BIZ42_05380
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Entry
BIZ42_05380 CDS
T04630
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slm02000
]
BIZ42_05380
Transporters [BR:
slm02000
]
Other transporters
Pores ion channels [TC:
1
]
BIZ42_05380
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AOX61677
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Position
1221019..1223469
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AA seq
816 aa
AA seq
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MSRPSASRLGLAIALVLSSPLLAQDVLAQDAPNTAKTLDTVIVTGTRAVDRTVLESTSPV
DVLTAEDIRKAGVVNGELGSALQALLPSFNFPRQSNSGGADHIRAAQLRGLSPDQVLVLV
NGKRRHSSALVNTDSKIGKGTTPVDFNAIPVSAIKRIEVLRDGAGALYGSDAVAGVINVI
LDDAPEGGAFEASFGANHTDLKPIDRTLTDGQTSYASAKVGTRLGDEGGFLRVGLELKNH
EGTNRAGFDQIPPWDQTPTNLALQGKRNYVLGDGKTKDLNAWYNAQLPFGETSTFYSFAT
FNQRDSEGANYFRYPDSDANWAQVYTNGYRPISEGENRDVQAVAGAKGQWGEWNYDASLD
YGINTFTYRLRNSLNASLGPTSPTRFKTGDYRNELTVANVDLGRVFSQGESITHSLGLGL
EARRDHYQTRPGDPTSYAAGSFTDRPTGSQAGGGLTPQDATSLSRDVASAYASLSSQFGE
HFSSDLAARYEHSDDFGGELTGKLGLRYEFTPAFALRGAISNNFRAPSLAQIGYESTSTG
YNAAGQLVQGRVLSVNNPIARGLGATDLKPEKSLNTSLGFTSRIGEHFDVSLDFFQIDID
DRIALSESITGDALTDYVQQQFGVAGLQSASFFVNAADTRTRGAELVSNWRQSLGDGELV
LTGTYAYTKTTLKNVLATPPGLLALDPDYVLFGVEETNTLTDATPRTRAALAASWADDRW
SLSSRLSRYGSVTRVFNFGDGYIPRQTYGAEWQLDAEVEYKITPQWSVALGGQNLTDNYS
DLSNDDIYYFGNLPYDVLSPIGSNGAYYYGRVRYTF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgtccgcgtcgcgccttggccttgccatcgcgctcgtcctttcctccccc
ctgctggcccaggacgtacttgcgcaggacgcgccgaacaccgccaaaacgctggacacc
gtgatcgtcaccggcacccgtgccgttgaccggaccgtgctggaatccacctcgccggtg
gatgtgctcaccgccgaggacattcgcaaggccggcgtggtcaatggcgagctgggcagc
gccctgcaggcgctgctgccctcgttcaacttcccgcgccagtccaactccggcggtgcc
gaccacatccgggccgcccagctgcgcggcctctcgcccgatcaggtgctggtgctggtc
aacggcaagcgccgccacagcagcgccctggtcaacaccgacagcaagatcggcaagggc
accaccccggtcgatttcaacgccatcccggtcagcgcgatcaagcgcatcgaagtgctg
cgcgatggcgccggtgcgctgtacggctccgatgcggtggccggcgtgatcaacgtgatc
ctggatgacgcgccggaaggcggcgcattcgaagcgagcttcggcgccaaccacaccgac
ctcaagccgatcgaccgcaccctcaccgacggccagaccagctacgccagtgccaaggtc
ggcacccggctgggtgatgagggcggcttcctgcgcgtgggcctggagctgaaaaatcac
gaaggcaccaatcgcgccggcttcgaccagatcccgccgtgggaccagaccccgaccaac
cttgccctgcagggcaagcgcaactacgtgctcggcgatggcaagaccaaggacctgaac
gcctggtacaacgcgcagctgccgttcggtgaaacctccacgttctacagcttcgccacc
ttcaaccagcgcgacagcgaaggcgcgaactacttccgctacccggacagcgacgccaac
tgggcgcaggtctacacgaacggctaccgtccgatctccgagggcgaaaaccgcgacgta
caggccgtggccggcgcgaagggccagtggggcgagtggaactacgatgcgagcctggat
tacggcatcaacacgttcacttaccgcctgcgcaactcgctcaacgcctcgctgggcccg
accagcccgacccggttcaagaccggtgattaccgcaatgagctgacggtcgcgaacgtc
gacctcggccgtgtgttctcgcagggcgagagcatcacccacagccttggcctgggcctg
gaagcgcgccgcgaccattaccagacccgcccgggcgatccgaccagctatgccgcgggt
tcgttcacggatcgcccgaccggctcgcaggccggtggtggcctgaccccgcaggatgcg
acctcgctctcgcgcgatgtcgccagcgcctacgccagcctgtccagccagttcggtgag
catttctcaagcgatctggccgcacgctacgagcacagcgatgatttcggtggcgagctc
accggcaagctgggcctgcgctacgaattcacgccggccttcgcgctgcgcggtgcgatc
tcaaacaacttccgtgccccgtcgctggcgcagatcggctacgaatccacgtccaccggc
tacaacgcggccggccagctggtgcagggccgcgtgctgtcggtgaacaatccgatcgcg
cgtggcctgggcgccaccgacctgaagccggagaagtcgctcaacaccagcctgggtttc
accagccgtatcggcgagcacttcgatgtctcgctggacttcttccagatcgacatcgat
gaccgcatcgcactgtcggaaagcatcaccggtgatgcgctgaccgactacgtgcagcag
cagttcggcgtggccggcctgcagagcgccagcttcttcgtcaacgccgccgatacccgc
acccgcggcgcggaactggtgagcaactggcggcagtcgctgggcgatggcgagctggtg
ctgaccggcacctacgcctacaccaagaccacgctgaagaacgtgctcgccaccccgccg
ggcctgctcgcgctggatccggactacgtgctgttcggcgtggaagagaccaatacgctg
accgatgcgaccccgcgcacccgcgccgcgctggccgccagctgggccgatgatcgctgg
tcgctgagcagccgcctgagccgctatggcagcgtcacccgcgtgttcaacttcggtgat
ggctatattccgcgccagacctacggggccgagtggcagctggatgccgaggtggaatac
aagatcaccccgcagtggagcgtggcgctgggcgggcagaacctgaccgacaactactcg
gatctgtccaacgacgatatctactacttcggcaacctgccgtatgacgtgctgtcaccg
atcggtagcaatggtgcgtattactacgggcgcgtgcggtatacgttctga
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