Stenotrophomonas sp. LM091: BIZ42_05405
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Entry
BIZ42_05405 CDS
T04630
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slm03009
]
BIZ42_05405
Enzymes [BR:
slm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BIZ42_05405
Ribosome biogenesis [BR:
slm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BIZ42_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
AOX61681
LinkDB
All DBs
Position
complement(1228480..1229475)
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AA seq
331 aa
AA seq
DB search
MSDTPADSDSPRQAIVPDTAAGRRFDAVLAELFPEFSRSKLTEWIKSGDVLLDGDTVRGR
DPVRGGEVASLHVVLDTQTHAEPEDIPLEVLYEDEHVFVINKPVGLVVHPGAGNPTGTLV
NALLFRDPSLSVLPRAGIVHRLDKDTSGVMVIARTIQAQTALVEQLSAREVHRQYLAVVV
GALVSGGTATAGIDRHPRDRIRMAVREDGKEAITHYRLRERFRAHTALECRLETGRTHQI
RVHMAHLRHPIIGDQLYGGALKLPKGASDELVAELRGFKRQALHAETLEFVHPITGEKIT
NSAPPPADMQALLHALREDSKRFAEQERNRR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatacccctgctgattccgattccccccgccaggccatcgtgcccgataccgcc
gccggccggcgtttcgacgcggtcctggccgagctgttccccgaattctcccggtccaag
ctgaccgagtggatcaagtccggggacgtcctgctggacggcgacaccgtgcgcgggcgc
gacccggtgcgcggcggcgaggtggccagcctgcatgtcgtgctcgacacccagacccat
gccgagccggaggacatcccgctggaggtcctgtacgaggacgagcacgtgttcgtgatc
aacaagccggtcggcctggtggtccatcccggcgcgggcaacccgaccggtactctggtc
aatgcgctgctgttccgcgatccctcgctgtcggtgctaccgcgcgcgggcatcgtgcac
cgcctggacaaggacaccagcggcgtgatggtgatcgcccgcacgatccaggcgcagacc
gcactggtggagcagctctccgcccgtgaagtgcaccgccagtacctggccgtggtggtg
ggtgcgctggtctccggcggcaccgcgaccgccggcatcgaccgccacccgcgcgaccgc
atccgcatggccgtgcgcgaagacggcaaggaagcgatcacgcactaccgcctgcgcgag
cgtttccgtgcgcacaccgcgctggagtgccgcctggaaaccggccgtactcaccagatc
cgcgtgcacatggcgcacctgcgtcacccgatcatcggcgatcagctgtatggcggtgcg
ctgaagctgcccaagggcgccagcgatgaactggtcgccgagctgcgcggcttcaagcgc
caggcgctgcacgctgaaacgctggagttcgtgcacccgatcaccggtgagaagatcacc
aacagcgcgccgccgccggctgacatgcaggccctgctgcacgccctgcgcgaagacagc
aagcgcttcgccgagcaggaacgcaaccgccgctga
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