Stenotrophomonas sp. LM091: BIZ42_05810
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Entry
BIZ42_05810 CDS
T04630
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BIZ42_05810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slm03021
]
BIZ42_05810
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_05810
Enzymes [BR:
slm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BIZ42_05810
Transcription machinery [BR:
slm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BIZ42_05810
DNA repair and recombination proteins [BR:
slm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BIZ42_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AOX61754
LinkDB
All DBs
Position
complement(1324505..1324804)
Genome browser
AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVQATLDNSETEDKPTVLALREIAARKI
DNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcaccgtagaagattgtctggaagtcgtgaacaaccgtttcgaactggtc
atgatggcgtccaagcgcgcccgtcagctggccaatggcgtccaggccaccctggacaac
agcgaaaccgaagacaagccgaccgtgctggcgctgcgcgaaattgccgcccgcaagatc
gacaacgccctgatcgacgaagtcgagaaggccgagcgcgagcgtgccgagcgtgaagca
ctggaatgggccgctgccgaagtcgtcgccgacgaagacatgtccaagaacgacgactga
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