Stenotrophomonas sp. LM091: BIZ42_06095
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Entry
BIZ42_06095 CDS
T04630
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm00730
Thiamine metabolism
slm01100
Metabolic pathways
slm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BIZ42_06095
Enzymes [BR:
slm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BIZ42_06095
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AOX61805
LinkDB
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Position
complement(1378749..1380626)
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AA seq
625 aa
AA seq
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MNAALSSLQQQAQQLSESVTRPIPGSRKIHVPGSRSDLQVPMREIVLTRTPTLFGGEENA
PVTVYDTSGPYTDPNARIDLSVGLPPLRAGWVAERGDTDVLDGLSSAFGRSRETDARLDA
VRFPSRLQPRRARSGANVTQMHYARRGIITPEMEFVAIRENQRIEAIVDAALLRQHPGEA
FGASIPARITPEFVRDEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWILRNSPVAIGTVPIYQALEKVDGRAEE
LTWDIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAGRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICEIMKAYDVTFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYRIAAHASDLAKGHPGAQVRDNALSKARFEFRW
EDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAGQGLDER
TALEVGMAEKSAQFRDLGAEVYRQE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgctttcctccctgcagcagcaggcccagcaattgtccgaatcggtcacg
cgcccgattcccggctcacgcaagatccatgtgccgggttcacgcagcgacctgcaggtg
ccgatgcgcgagatcgtgctgacccgcacgccgaccctgtttggtggggaagagaacgcg
ccggtcaccgtgtatgacacgtctggcccgtataccgatccgaatgcgcggatcgacctc
tccgtggggctgccgcccttgcgtgccggctgggtggccgagcggggcgatactgatgtg
ctcgatggcctgagctcggcatttggccgctcccgcgaaaccgatgcgcgcctggatgcg
gtgcgcttcccgtcgcggctgcagccacggcgcgcgcggtccggtgccaacgtcacccag
atgcactacgcacggcgcggcatcatcaccccggaaatggaattcgtcgccatccgcgaa
aaccagcgcatcgaggccatcgtcgatgccgcgctgctcaggcagcatcccggcgaagcc
ttcggcgcgtccatcccggcgcgcatcacgccggagttcgtccgcgatgaaatcgcccgc
ggccgtgcggtgctgcccaacaacatcaaccatccggaaagcgaaccgatgatcatcggc
cgcaacttcctcaccaagatcaacgccaacatcggcaacagcgcggtttcctcgggcatc
gccgaggaagtggaaaagctggtctgggcgatccgctggggcggtgacaccgtgatggac
ctgtccaccggcaagcacatccacgagacccgcgaatggatcctgcgcaactcgccggtg
gcgatcggtaccgtgccgatctaccaggcactggaaaaggtcgatggccgcgcggaggaa
ctcacctgggacatcttccgcgacacgctgatcgagcaggccgagcagggcgtggactac
ttcaccatccatgccggtgtgctgctgcgctatgtgccgttgaccgccgggcgcgtgacc
gggatcgtctcgcgtggcggctcgatcatggccaagtggtgcctggcacaccacaaggaa
aacttcctgtacacccacttcgaagacatctgcgagatcatgaaggcctacgacgtgacc
ttctcgcttggcgacggcctgcgcccggggtgcatcgccgacgccaacgacgcggcgcag
ttcggtgagctggaaacactgggtgagttgaccaagatcgcctggaagcacgacgtgcag
accatgatcgaaggccccggccacgtgccgatgcagctgatcaaggaaaacatggacaag
cagctgcgtgagtgcggtgaggcgccgttctacacactcggcccgctgaccaccgatatc
gccccgggctatgaccacatcaccagtgcgatcggcgcggccatgatcggctggtacggc
acggcgatgctctgttacgtcacgcccaaagagcacctggggctgcccaaccgccaggac
gtgcgcgacggcatcatggcctaccgcatcgccgcgcacgcctcggacctggccaagggc
catcccggcgcgcaggtgcgtgacaacgcgctgagcaaggcacgcttcgaattccgctgg
gaagaccagttccatctcgggctggacccggagaaggccaaggagttccacgacgaaacg
ctgcccaaggacgcgcacaagctggcccacttctgctcgatgtgcggcccgcacttctgc
tcgatgaaaatcacccaggacgtgcgtgactatgcagcggggcagggcctggatgagcgc
acggcgctggaggtcggcatggctgagaagtcggcacagttccgcgatctgggcgcagag
gtgtatcggcaggagtaa
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