Stenotrophomonas sp. LM091: BIZ42_07545
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Entry
BIZ42_07545 CDS
T04630
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BIZ42_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_07545
Enzymes [BR:
slm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIZ42_07545
DNA repair and recombination proteins [BR:
slm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BIZ42_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOX64239
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All DBs
Position
1717647..1719827
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AA seq
726 aa
AA seq
DB search
MTSSSSTLRVALPVPLPQLFDYAPPPGPVPDPGMTGQRVRVPFGSRELVGVVAGIGQVED
PGSLRAAIEWIDTTPLLTGELWRSLQWLARYTHAPLGEVISTGLPGPLRRGEAVPDTHQW
GWQLTNAGHDPQPKLRNGTRPQRLAECLAEGVVNEDRLDTLMDDWRSAARSLAKRGLVER
IALAHSPAVASPAGGPAPNAEQADAIAAITAADGFAAYLLDGVTGSGKTEVYLQAIVACL
ARGKQALVLVPEIGLTPQTLSRFRNRLGIPVHVLHSGLNDNERARVWAAAARGEAQVIVG
TRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRAKALDVAVVLGSATPSLE
SLHNAQAGRYTHLRLKQRAGAARPPVVRVLDVRKRPLRDGLSPEVLAGITQHLQARHQVL
VFKNRRGYAPVLLCHDCGWTAPCQRCDAPMTVHAGGRRLQCHHCGARQSAPLACPDCGSL
ALQPQGIGTERLEEHLVEAFPDFPVIRIDRGTTGKRDALETQLASLGDRAGILVGTQILA
KGHDLPKLTLVVVVGIDEGLFSADFRASEKLAQQLIQVAGRAGRAVDAGEVWLQTHHPGH
PLLETLVNGGYHAFAHAELQQREAAGFPPFAHLALLRAEAQQVEHANAMLSAVRALIPDD
AAVERYGPMPAPMPRRAGYQRTQLLLSSPARRPLHGVLDQVTPQIAGLPQARRVRWSLDV
DPMDLY
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctcgtcttcgaccctgcgcgtcgccctgccggtgccgctgccgcaactgttc
gactacgccccgccgcctgggccggtcccggaccccggaatgaccgggcaacgggtacgg
gtgccgttcggctcccgcgagctggtgggggtggtggccgggatcggtcaggtggaggat
cccggcagcctgcgcgcggcgatcgagtggatcgacaccacgccgctgctgaccggcgag
ctgtggcgctcgctgcagtggctggcgcgctacacccatgcgccgctgggcgaggtgatc
agtacgggcctgcccggcccgctgcggcgcggtgaagcagtgccggacacccatcagtgg
ggctggcagctcaccaacgccgggcacgacccgcagccgaagttgcgcaacggcacccgc
ccgcagcgactggccgagtgcctggccgagggggtggtgaacgaagaccgcctggatacg
ttgatggacgactggcgcagcgccgcccgctcgctggccaagcgcgggctggttgaacgg
atcgcgctggcccattcgccggccgtggcctcgcccgcaggcggccccgcgcccaacgcc
gaacaggccgacgcgatcgccgcgatcaccgccgccgacggctttgccgcctacctgctc
gatggcgtgaccggcagtggcaagaccgaggtctacctgcaggcgatcgtggcgtgcctt
gcgcgtggcaagcaggcgctggtgctggtgccggagatcgggctgaccccacagacgctg
tcgcgcttccgcaatcgcctgggcattccggtgcatgtgctgcactcgggcctgaacgac
aacgagcgtgcccgcgtgtgggcggctgccgcgcgaggtgaagcgcaggtcatcgtcggc
acgcgctcggcggtgttcaccccgctgccgaatgcgggcctgatcgtgatcgacgaagag
cacgacggcagctacaagcaacaggacggcatccgctaccacgcgcgggatttcgcgctg
gtgcgcgccaaggcactggacgtggcggtggtgctcggcagtgccacgccctcgctggaa
tcgctgcacaacgcgcaggccggccgctacacccacctgcgcctgaagcagcgcgcgggc
gcggcgcggccccccgtggtgcgcgtgctcgacgtgcgcaaacggccgctgcgcgatggg
ctatcgccggaggtactggccggcatcacccagcatctgcaggcccggcaccaggtgctg
gtgttcaagaaccgccgcggctatgcacccgtgctgctctgccatgactgcggttggacc
gccccgtgccagcgctgcgatgcgccgatgaccgtgcacgccggcggccgccgcctgcag
tgccatcactgtggcgcacgccagtccgcgccgctggcctgcccggactgcggcagcctg
gcgctgcagccgcagggcatcgggacggagcggctggaagaacatctggtcgaggccttc
ccggattttccggtgatccgcatcgaccgcggcaccaccggcaagcgcgacgcgctggag
acccagttggcctcgctcggcgatcgcgcggggatcctggtcggcacgcagatcctggcc
aaggggcacgacctgccgaagctgaccctggtggtcgtggtcggcatcgatgaaggcctg
ttctcggccgacttccgcgccagtgaaaaactcgcgcagcagctgatccaggtcgccggc
cgcgccgggcgcgcggtggatgcgggggaggtctggctgcagacccaccacccggggcat
ccgttgctggagacactggtcaacggcgggtatcacgcctttgcccatgcggaactgcag
cagcgcgaggcggccggttttccgcccttcgcgcatctggcactgctgcgtgccgaagcg
cagcaggtggagcatgccaacgcgatgctcagtgccgtgcgcgcgttgattcccgacgat
gcggcggtggaacgctatggcccgatgcccgcgccgatgccgcgccgcgcgggctaccag
cgcacccagttgctgctgtcctcaccggcgcggcgcccgttgcatggtgtgctggaccag
gtgacgccgcagattgccggcttgccgcaggcacgccgggtacgctggtcgctggatgtg
gatccgatggatctgtattag
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