Stenotrophomonas sp. LM091: BIZ42_07835
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Entry
BIZ42_07835 CDS
T04630
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BIZ42_07835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_07835
Enzymes [BR:
slm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BIZ42_07835
DNA repair and recombination proteins [BR:
slm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BIZ42_07835
Prokaryotic type
BIZ42_07835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOX62126
LinkDB
All DBs
Position
complement(1800103..1800822)
Genome browser
AA seq
239 aa
AA seq
DB search
MNDDVVPSIQLEPSWKTRIGDYLLRPDMRELSAFLRQRKAAGAQVFPPGPQIFAAFDATP
FDQVKVVILGQDPYHGYGQAHGLSFSVMPGVPVPPSLLNIYKEIEADLGIPRPDHGCLLP
WAHRGVLLLNAVLTVEAGNAGSHQRRGWEGFTDHVVDTLNREREGLVFLLWGSYAQQKGK
VIDTGRHRVLKAPHPSPLSAHRGFLGCRHFSMANEYLQRRGNARIDWSLPPRAALELPA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgatgtagtacccagcatccagctcgaaccgagctggaagacgcgtatcggt
gattacctgctgcggccggacatgcgggagttgtccgcttttctgcgccagcgcaaagcg
gccggagcccaggtgttcccaccgggcccgcagatctttgccgccttcgatgccacgccc
ttcgaccaggtcaaggtggtcatcctcggccaggatccgtatcacgggtacggccaggcg
cacggcctgagcttctcggtgatgccgggcgtgccggtaccgccgtcgctgctcaacatc
tacaaagagatcgaggccgatctgggcatcccgcgcccggaccacggctgcctgctgccg
tgggcgcaccgcggggtgctgctgctcaatgcggtgctgacggtggaggcgggcaacgcc
ggctctcaccagcggcgtggctgggagggcttcaccgaccatgtggtggatacgctcaac
cgcgagcgagagggcctggtgttcctgttgtggggcagctacgcccagcagaagggcaag
gtcatcgataccggccggcaccgcgtgctcaaggcaccgcacccttcgccgctgtcggcg
catcgcggcttcctgggctgccgccatttttcgatggccaatgagtacctgcagcgccgc
ggcaacgcgcgcatcgactggtcgctgccgccgcgtgccgcgctggaactgccggcctga
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