Stenotrophomonas sp. LM091: BIZ42_09075
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Entry
BIZ42_09075 CDS
T04630
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BIZ42_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slm03400
]
BIZ42_09075
Enzymes [BR:
slm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BIZ42_09075
DNA repair and recombination proteins [BR:
slm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BIZ42_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AOX62348
LinkDB
All DBs
Position
complement(2072439..2073209)
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AA seq
256 aa
AA seq
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MKIASWNVNSLNVRLPHLEQWLTAFAPDVVGIQETKMEDHKFPDAVLAGLGYRSVFAGQK
TYNGVALLSREPAQDVQIGIPGFEDEQKRVIAGTVNGVRIINLYVVNGQDVGTDKYAYKL
RWLEAVHAWVEAELARYPELVVMGDFNIAPDARDVHDPLVWNENHILTSTAERGALNKLL
QLGLHDAFRLHSEEEGVFSWWDYRAAGFRRNLGLRIDLTLVSDALKARALASGIDREPRT
WERPSDHAPAWVELAP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcctcctggaacgtcaattcgctcaacgtgcgcctgccgcacctggaacaa
tggctcacggcgttcgcgccggacgtggtcggtatccaggaaaccaagatggaggaccac
aagttccccgatgcggtgctggccgggctgggctaccgcagcgtgtttgccgggcagaag
acctacaacggcgtcgcgctgctttcgcgcgaaccggcgcaggacgtgcagatcggcatt
cccggtttcgaggatgagcagaagcgcgtcatcgccgggaccgtcaacggcgtgcgcatc
atcaatctgtacgtcgtcaacggtcaggacgtcggcaccgacaagtacgcctacaagctg
cgctggctggaggccgtgcatgcctgggtcgaggccgaactggccaggtacccggaactg
gtggtgatgggcgacttcaacatcgcccccgatgcccgcgacgtgcacgacccgctggtc
tggaacgagaaccacatcctgacctccaccgccgagcgcggcgccctgaacaagctgctg
cagctgggcctgcacgatgcgttccgcctgcatagcgaggaagaaggtgtgttcagctgg
tgggattaccgggcggccggcttccgccgcaacctgggcctgcgcatcgacctgaccttg
gtctccgacgcgctcaaggcgcgcgcgctggcctcgggcatcgaccgcgagccgcgcacc
tgggagcgccccagcgaccatgcgccggcgtgggtggagctggcgccgtaa
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