Stenotrophomonas sp. LM091: BIZ42_13490
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Entry
BIZ42_13490 CDS
T04630
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slm01011
]
BIZ42_13490
Enzymes [BR:
slm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BIZ42_13490
Peptidoglycan biosynthesis and degradation proteins [BR:
slm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BIZ42_13490
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GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
AOX63125
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Position
complement(3071651..3072865)
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AA seq
404 aa
AA seq
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MSRRLLPLALGLAIAVAGSAGAQSLTAGMSQNVAGLSSLPLTAAALPPASVRNGQDIFAS
FRDGLAEPTCDAEATSPRWQKQFAHAPSRLANQDDDALVLFGYVVEELRRSDLPTEFALI
PFVESGYRPNARNGGGPAGLWQFIATTAKNHRVQMTPGYDGRLSAVDSTQAAVRYLKTLH
GMFGGDWRLATMAYNAGEYRVLQSLRKAGMNAQNARPAELPGLSPVTYAYVEKLHALACV
LEDAETEPAVMASLDRTVPVLKGHTLPAGTSVQQWAQQRDLDPARIARLNPALASGKGRP
AGQVTVLAPTAHAPVDASASVAAIAVAPSAPVDSPAARTAPAPAATRTVASADRPRSRRH
TVRDGESPWTIARRYGMPLKALLSLNGLSGSSVLKPGAVLRVED
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggcgattgttgccgctcgcgctgggcctggcgatcgccgtggccggcagcgcg
ggcgcccagtcgttgaccgccggcatgtcgcagaacgtggccggcctgtcctccctcccc
ctgaccgctgcggcgctgccgccggcctcggtgcgcaacgggcaggacatcttcgccagc
ttccgcgatggcctggctgaacccacctgcgacgccgaggcgaccagcccgcgctggcag
aagcagttcgcgcatgccccctcgcgcctggccaaccaggacgatgacgccctggtgctg
ttcggctatgtggtggaagagctgcgcagatccgacctgccgaccgaatttgcgctgatt
cccttcgtggaaagcggctaccggcccaacgcccgcaacggcggcggcccggccggcctg
tggcagttcatcgccaccaccgccaagaaccaccgcgtgcagatgaccccgggctacgac
ggccgcctctcggcggtggattccacccaggccgcggtgcgttacctcaagaccctgcac
ggcatgttcggcggcgactggcgcctggccaccatggcctacaacgccggcgagtaccgg
gtcctgcaatcgctgcgcaaggccggcatgaacgcgcagaacgcgcgtccggccgagttg
cccggcctgtcgccggtcacctatgcctatgtcgagaagctgcacgccctggcctgcgtg
ctggaagacgcagaaaccgagccagcggtgatggcctcgctggaccgcaccgtgcccgtg
ctgaaggggcataccctgccggcgggcaccagcgtccagcagtgggcccagcagcgcgac
ctggatccggcccggatcgcccggctcaacccggccctggccagcggcaagggccgcccg
gccggccaggtgacggttctggccccgaccgcgcatgcgccggtggatgccagcgccagc
gtggccgccattgcggtggctcccagcgcaccagtggatagcccggccgcccgtacggcg
cctgcgccggccgccacccgcacggtggccagcgcggatcgtccgcgcagccgccgccac
accgtgcgcgatggcgaatcgccctggaccatcgcccgccgttacgggatgccgttgaag
gccctgctgtcgctcaatggcctcagtggcagcagtgtgctcaagccgggagcggtgttg
cgcgtcgaagactga
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