Stenotrophomonas sp. LM091: BIZ42_14110 Help Entry BIZ42_14110       CDS       T04630                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism slm  Stenotrophomonas sp. LM091 Pathway slm02020   Two-component system slm02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:slm00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     BIZ42_14110  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     BIZ42_14110  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:slm03021]     BIZ42_14110 Transcription machinery [BR:slm03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      BIZ42_14110 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HisKA HTH_IclR HTH_38 HTH_Crp_2 HTH_23 Sigma70_r4 HTH_Tnp_ISL3 Motif Other DBs NCBI-ProteinID:  AOX63225 LinkDB All DBs Position complement(3197989..3199428) Genome browser AA seq 479 aa AA seqDB search MKARLQTSMGQHLVMTPQLRQAIKLLQMSSAELELEINEAVETNPLLDWAENAEPALEAS PGEDSPPPAPADTHADGEHQVSAGDEWSPGEGDWTSGSSGGSFDDDDNGSAAERVAETES LADHLLWQLHLSHLSVRDRSIGAALIDAFEEDGYLREPLTAIAETLRPAIQADEAEILTV LHQIQRFDPVGVGARSLGECLDLQLLVLPADTPGLALARRIADGPLERLPRSGVAGIAHE LREPLAEVEVAVQLLRSLDPRPGTQIGELSHDSYVVPDCVVWRQNGVWRAALAGHAGPRV VIHRGYEQLIRRCGEADAGYMRAHLQEARWLLKGLEARGETLLRVMRCLLDQQAAFLEFG EQALRPLTLREVAGELGLHESTISRAIARKYVRTPRGTLPLRAFFASGIDTDSGGEASST AIQAMLRRLIDDENPRKPLSDAKLADLLKTSGIPVARRTVAKYREAMNISASHERVRIV NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt atgaaagcacggctgcagacatcgatggggcaacacctggtcatgacgccgcagctgcgt caggcgatcaagctgttgcagatgtccagcgccgagctggagctggaaatcaacgaggcg gtagaaaccaacccgctgctggactgggccgagaacgctgaaccggcgctcgaggccagc cccggcgaggacagtcccccgcccgcccccgccgatacccatgccgatggcgagcaccag gtctccgccggcgacgagtggtcgcccggcgaaggcgactggaccagcggcagcagtggc ggctccttcgacgatgacgacaacggcagtgccgccgaacgcgtggccgagaccgaatcg ctggccgaccacctgctctggcagctgcacctgtcgcacctgtcggtccgcgaccgcagc atcggcgcggccctgatcgacgctttcgaagaggacggctacctgcgcgagccgctcacg gccatcgccgagaccctgcgcccggccatccaggccgacgaggccgaaatcctgaccgtc ctgcaccagatacagcgcttcgacccggtcggggtgggtgcgcgcagcctgggcgagtgc ctggacctgcagctgctggtactgcccgccgatacccccggcctggccctggcccggcgc atcgccgatgggccgctggagcgcctgccgcgcagcggcgtggccggcatcgcccacgag cttcgcgagccgctggccgaggtcgaggtggcggtgcagctgctgcgctcgctggacccg cgcccgggcacccagatcggcgagctctcccacgacagctacgtggtgcccgactgcgtg gtctggcgccagaacggcgtctggcgcgcggccctggccggccacgctgggccgcgggtg gtcatccaccgcggctacgaacagttgatccgccgctgcggggaggccgacgccggttac atgcgcgcccatctgcaggaggcgcgctggctgctcaagggcctggaggcccgcggcgag accctgctgcgggtgatgcgctgcctgctcgaccagcaggccgccttcctggagttcggc gaacaggccctgcgcccgctgaccctgcgggaagtggccggcgagctcggcctgcacgaa tccaccatttcccgggcgatcgcccgcaagtacgtgcgcaccccgcgcggcacgctgccg ctgcgcgcgttcttcgcctccggcatcgacaccgacagcggtggcgaagcctccagcacc gccatccaggccatgctgcgccgcctgatcgatgacgagaacccgcgcaagccgctttct gacgccaagctggctgacctgctcaaaacctcgggaataccggtggcgcgacgcaccgtg gcgaagtatcgtgaagccatgaacatttccgcctcgcacgaaagggtacgaatcgtctga

DBGET integrated database retrieval system