Stenotrophomonas sp. LM091: BIZ42_16860
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Entry
BIZ42_16860 CDS
T04630
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slm
Stenotrophomonas sp. LM091
Pathway
slm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BIZ42_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slm03019
]
BIZ42_16860
Enzymes [BR:
slm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BIZ42_16860
Messenger RNA biogenesis [BR:
slm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BIZ42_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
AOX63711
LinkDB
All DBs
Position
3782649..3784016
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AA seq
455 aa
AA seq
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MGNPENSTGSANINSSATSPFSLRVIPRDQHNISRKDISPNALRVLYRLRDSGFAGYLVG
GAVRDLLVNGHPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
IDDGSGDREMENGMLVRDNVYGSIEDDAIRRDFTCNALYYAIEDFSVRDYTGGFEDVQAR
LMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEATAEPLPRLANLLAEAAPARLFEEV
LKLFLSGHGVASFEGLERYGLLDVMFPESAAALRSNRSGALRRMVIEGLHNTDLRVANDE
PVSPSFLFALLLWPAFCRALASLQKQGVALEEAQRRAADRVTLHQLTTIALPRRFSLPMQ
EIWLLQGRFSSRQRKRVIRTLTHPRFRAAYDFLVLRQVASSEHEADVAFWREAQLQSGTE
LDSALDAAQADGEGEDGAPRKRRRRRRRPGGVAGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaatcccgaaaactcaaccggaagcgccaacatcaattcctctgctacatcaccg
ttcagcctgcgcgtgatcccgcgcgatcagcacaacatctcccgcaaggacatcagcccc
aacgccctgcgcgttctgtaccggctgcgtgattccgggtttgccggttacctggtcggc
ggcgccgtccgcgatctgctggtgaacggccaccccaaggatttcgacgttgccaccgac
gcgacgcccgagcaggtcaagcagttgttccgcaactgccgactgatcggccgccgcttc
cgcctggcgcacgtggtgttcggccgcgagatcatcgaggtcgccaccttccgcgccaac
atcgacgatggcagcggcgaccgtgagatggaaaacggcatgctcgtgcgcgacaacgtg
tacggcagcatcgaagacgacgcgatccgccgtgacttcacctgcaacgccctgtactac
gcgatcgaggatttctcggtgcgcgattacaccggcggctttgaagacgtgcaggcccgc
ctgatgaagctgatcggcgaccccgagcagcgctaccgcgaagacccggtgcgcatgctg
cgcgcggtccgtttggcggccaaactgggcttccagatcgaagaggcgaccgccgagccg
ctgccgcgcctggccaacctcctggccgaggccgccccggcgcgcctgttcgaagaagtg
ctcaagctgttcctgtccgggcacggcgtggccagcttcgaaggcctggagcgctatggc
ctgctcgacgtgatgttcccggaaagcgccgcggcgctgcgcagcaaccgcagtggcgcg
ttgcgccggatggtcatcgaaggcctgcacaacaccgacctgcgcgtggccaatgacgag
ccggtgtcgccgtcgttcctgttcgcgctgctgctgtggccggctttctgccgcgccctg
gccagcctgcagaagcagggtgtcgcgctggaagaagcccagcgccgcgccgctgatcgc
gtgaccctgcaccagctgaccacgatcgcgctgccgcgccgcttctcgctgccgatgcag
gagatctggctgctgcagggccgcttcagttcgcgccagcgcaagcgggtgatccgcacg
ctgacccatccgcgcttccgtgccgcctacgacttcctggtcctgcgccaggtcgcctcc
agcgagcacgaagccgatgtcgcgttctggcgcgaagcgcagctgcagtccggcacggag
ctggattcggcgctggatgccgcccaggccgacggtgagggcgaagacggtgcaccgcgc
aagcgtcgtcgccgccgccgtcgtcccggtggagtggcaggcgagtaa
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