Stenotrophomonas sp. LM091: BIZ42_17395
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Entry
BIZ42_17395 CDS
T04630
Name
(GenBank) PAS domain S-box protein
KO
K21025
multidomain signaling protein FimX
Organism
slm
Stenotrophomonas sp. LM091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
Response_reg
PAS_8
PAS_4
PAS_3
Scy
Motif
Other DBs
NCBI-ProteinID:
AOX63812
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Position
complement(3891901..3893970)
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AA seq
689 aa
AA seq
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MQNANDMTVRLLIVDDSGENAETIVSTLRNSGIAVRPTRPQHGEELAQVLGTQPIDLVLV
AAAQSIPLLQVTQQIAASGKDIPMILLAESINENEWVEAGANGIRAIALRHRPEHLLAVV
RNEWTDLHARRGLRRIEAQMRETERRCDALISSSRDPIAYVHEGMHIRANEAYLEMFGYE
TFEDVEGISLLDMVAPQHVDGFKQLLKSMSKGDAPPPQYQVDARNQDGAVFPATMEFTQA
SYEGESCLQVVFRRRMEFDPELAREVEDLRQRDQVTGLLNRPTFMLHVENAVAQAGRSEG
RFGLLLVEPDHYARLLPEIGLDSADALIGALARVLAQSVGDAAQVARFGEHSFAVLTEAP
YAQTVVLADQIRAAFAAQVFSIGERSATVTVSVGGVQVGEKIASIGQVLARATECTQAAL
ELGNTTRVFDPAAVDRVEEERIQHWVARIRQALDGDGFQLHYQPVLNLQGEALELYEAYL
RLEHNGELLSPTAFLGIAEEHGLLADINRWVVTHAIGMLAARRREGHVTHLMVKITPESF
NDPQMIVTLRRELQAQGVPGEQLWLHAPEAKVFTHLRNAQQFLAAIAPLGCRIGLEQFGS
GLDSFQLLAHFQPQFLKLDRDFTCDLASTREHSGKISEITARAQAANIRTIAEFVADANS
MSLLFSAGVDYVQGDFVGPAGPVMDFDFS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgcgaatgacatgacggtccgcctgctgatcgtggacgacagcggcgagaac
gccgagaccatcgtcagcacgctgcgcaacagcggcatcgcggtgcgcccgacgcgcccg
cagcacggcgaggaactggcccaggtcctgggcacccagccgatcgacctggtactggtc
gctgccgcccagagcatcccgctgctgcaggtcacccagcagatcgcggccagtggcaag
gacatccccatgatcctgctggccgagtcgatcaatgaaaacgagtgggtcgaggccggt
gccaatggcatccgcgccatcgcactgcgccaccgccccgagcacctgctggcggtggtg
cgcaatgaatggaccgatctgcacgcgcgccgcgggctgcgccggatcgaggcccagatg
cgcgagaccgagcgccgctgcgacgcgctgatctcctcctcgcgcgacccgatcgcctat
gtccatgaaggcatgcacatccgcgccaacgaggcctacctggagatgttcggctacgag
accttcgaggatgtggagggcatctcgctgctggacatggtcgccccgcagcacgtggac
ggcttcaagcagctgctcaagtcgatgagcaagggcgatgcaccgccgccgcagtaccag
gtggacgcacgcaaccaggacggggcggtgttcccggccacgatggagttcacccaggcc
agctacgaaggcgaatcctgcctgcaggtggtgttccgccgccgcatggagttcgacccg
gagctggcgcgcgaggtggaggacctgcgccagcgcgaccaggtcaccggcctgctcaac
cgaccgaccttcatgctgcatgtcgaaaatgccgtggcccaggccggccgcagcgagggc
cggttcggcctgctgctggtcgagcccgaccactacgcgcgcctgctgccggagatcggg
ctggactcggccgacgcgctgatcggcgcccttgcccgcgtgctggcccaatccgttggc
gacgctgcccaggtggcccgcttcggtgaacacagcttcgccgtgctcaccgaagcaccc
tacgcgcagaccgtcgtcttggccgaccagatccgggccgccttcgccgcgcaggtgttc
agcatcggcgagcgctcggccacagtcaccgtcagtgtcggcggcgtgcaggtcggcgaa
aagatcgccagcatcggccaagtgctggcgcgcgccaccgagtgcacgcaggcagccctg
gaactgggcaacaccacccgggtgttcgacccggcggcggtggaccgcgtggaagaagaa
cgcatccagcactgggtcgcccgcatccgccaggcgctggacggcgatggcttccagctg
cattaccagccggtgctcaacctgcagggcgaagcgctggagctgtacgaggcctacctg
cgcctggagcacaacggcgagctgctcagcccgaccgcgttcctgggcatcgccgaggag
cacggcctgctggccgacatcaaccgctgggtggtcacccacgcgatcggcatgctcgcc
gcacgcaggcgcgagggccacgtcacccacctgatggtcaagatcaccccggagtcgttc
aacgacccgcagatgatcgtcaccctgcgccgcgagctgcaggcccagggcgtcccgggc
gaacagctgtggctgcatgccccggaggcaaaggtgttcacccacctgcgcaatgcgcag
cagttcctggcggcgatcgcgccgctcggctgccggatcggcctggagcagttcggctcg
gggctggactcgttccagctgctggcccatttccagccgcagttcctcaagctggaccgc
gacttcacctgcgacctcgccagcacccgcgaacacagcgggaagatcagcgagatcacc
gcgcgggcgcaggccgccaacatccgcaccatcgctgagttcgtcgccgatgccaactcg
atgagcctgcttttcagtgccggggtggactacgtgcagggcgacttcgtcggcccggcc
ggcccggtgatggatttcgatttcagctga
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