Salipaludibacillus sp. LMS25: MM221_03015
Help
Entry
MM221_03015 CDS
T08296
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms03030
DNA replication
slms03410
Base excision repair
slms03420
Nucleotide excision repair
slms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM221_03015 (polA)
03410 Base excision repair
MM221_03015 (polA)
03420 Nucleotide excision repair
MM221_03015 (polA)
03440 Homologous recombination
MM221_03015 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slms03032
]
MM221_03015 (polA)
03400 DNA repair and recombination proteins [BR:
slms03400
]
MM221_03015 (polA)
Enzymes [BR:
slms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM221_03015 (polA)
DNA replication proteins [BR:
slms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MM221_03015 (polA)
DNA repair and recombination proteins [BR:
slms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MM221_03015 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM221_03015 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
MIER1_3_C
HHH_2
Imm64
CjCas9_WED-like
Motif
Other DBs
NCBI-ProteinID:
UTR15576
LinkDB
All DBs
Position
complement(635514..638159)
Genome browser
AA seq
881 aa
AA seq
DB search
MLNVEKLVLVDGNSIAYRAFFALPLLNNEKGVYTNAVYGFTTMILKILEDEQPTHMLVAF
DAGKTTFRHDTFKEYKGKREKTPPELAEQLPVMRDLLNAFNIRYYEVDNYEADDIIGTLA
TKAVNDQQQWKVKIYTGDKDLLQLVSPNVHVALTRKGITNVDTYDLQMVDDTYGITPKQI
VDMKGLMGDSSDNIPGVPGVGEKTALKLLKEYKTIEGVYKALDKVSGKKLKENLEQNKEQ
AFMSKKLAEIMLEAPVNVSLDQLKLGEKENDKLISLFKELEFNSLLDRLGMEETLSDLEE
LEHLDVQRVNHVTEDILQSPSAIVVEVLEENYHQAEIIGLAIANETGTYYLSADVVLKSD
VFKNWAADATRQKYIFNAKRAVVALGWQDVVMNGIIFDVQIASYLINPSASSHDIADIAK
RQKILKVQSDEAIYGKGKKRHIPEVDLLSQHLGRKAAAVLELKDDLQGELEENDQLDLFE
KLEMPLSVILGRMEMNGVAVNEDVLRKMGEDLTHRLEKIEKDIHKLAGTEFNINSPKQLG
EVLFEKLNLPVIKKTKTGYSTSADVLEKLQDAHEVIPLILHYRQLGKLNSTYIEGLLKVL
HKKTGKIHTIFNQAITQTGRLSSTEPNLQNIPIRLEEGRKIRHAFVPEHKHARILAADYS
QIELRVLAHISQDANLKQAFNDNMDVHTKTAMDVFGVAHTDVTDNMRRTAKAVNFGIVYG
ISDYGLSQNLGITRKEARTFIDKYFESYPGVKDYMDTIVEEARANGFVTTMLHRRRYLPE
LTSRNFNQRSFAERTAMNTPIQGSAADIIKKAMVDMAVKMEEQTMNSRLLLQVHDELIFE
VPEEELEQMTKLVPDVMEKAVELDVPLIADVAYGDTWYDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatgtggaaaaactcgtcttagtagacggaaatagtattgcatatcgcgctttc
tttgcattgccacttttaaataatgaaaaaggtgtatacacaaatgccgtatacggcttt
acaacgatgattctaaaaatattagaagacgaacaaccgacacacatgcttgtagcattt
gatgcaggtaaaacaacgtttagacatgacacgtttaaagaatacaaagggaaacgtgag
aagactcccccagaattagctgagcaattacctgttatgagagatttactaaatgccttt
aacattcgctactatgaagtagataattatgaagccgatgatattattgggacgcttgct
acaaaagctgtcaacgaccaacaacagtggaaggttaaaatttatacaggtgataaagat
ttacttcaactcgtatctccaaacgttcacgtagcgttgacacgcaaaggtattacaaat
gtagatacgtacgatttacaaatggtcgacgatacatacggcatcacgcctaaacaaatt
gttgacatgaaaggattaatgggagatagctccgataatatccctggagtgccgggtgtt
ggggaaaaaacagccttgaaactacttaaagagtataagaccattgaaggtgtttataag
gcacttgataaagtaagtggcaaaaaactaaaagagaatctcgaacaaaataaagaacaa
gcatttatgagtaaaaagcttgcggaaattatgcttgaagcaccagtaaatgtctcacta
gatcagttaaagttaggtgaaaaggagaatgacaagttaatcagcttgtttaaagaacta
gaatttaactctctccttgatcggctaggtatggaagaaactctttctgacttagaggag
ctagaacatctggacgtacaacgtgttaatcacgtgactgaagacatactacaatcgccc
tctgcaattgtcgttgaagtattagaggaaaattatcaccaagctgagattatcggctta
gcgattgccaatgaaacagggacatattacttatcggcagatgtggtcctaaaaagtgac
gtgtttaaaaactgggcagctgatgccacaagacagaagtatatttttaatgctaaaaga
gcggttgtcgctctcggatggcaggatgtggtgatgaatggtattatctttgacgtgcag
atagcttcttatttaattaatccatctgccagctcgcatgatatagccgatatcgctaaa
cggcagaaaatccttaaagtccagtcagatgaagcgatatatggaaagggaaagaagcgc
catattcctgaagtggatctcttatctcaacatttaggacgtaaagcagctgccgtgctt
gagttaaaagatgacttacaaggtgaactggaggagaacgaccagctagacctattcgaa
aaacttgaaatgccgttatccgtcattcttggaagaatggaaatgaatggcgtggcagta
aatgaagatgtcctaaggaaaatgggagaagacttaacacatcgtcttgaaaagatagaa
aaagacattcacaaacttgcaggcacggaatttaatattaattctcctaaacagcttggt
gaagtcttattcgaaaaactaaacttacctgttattaaaaaaacgaaaacaggctactcc
acttcagctgatgtactagaaaagttacaagatgctcatgaggtgatcccattaatattg
cactatcgccaattaggaaagctcaattcaacttacattgaaggtctattaaaagtactg
cataaaaagacaggaaaaattcatacgatttttaatcaagcgatcacccaaacgggaaga
ctgagctcaactgaacctaacttgcaaaatatcccaatacgccttgaagaaggacggaaa
atacgccatgcctttgtaccagaacataaacatgcacgaattttagctgctgattactcg
caaattgagctgcgtgtactcgctcacatctcacaagatgctaatttaaagcaagcattc
aatgataatatggacgtgcatacgaaaacagcgatggatgttttcggtgttgcccatact
gacgtgacggacaatatgagacgaacagcgaaggcagtcaactttggcatcgtttatggt
attagtgattacggtttgtcacaaaacttaggtatcacaaggaaagaggcgcgaaccttt
atagataaatattttgaaagttatcctggcgtcaaagactatatggacacgatcgtggaa
gaagcgagagcaaatggatttgtcacaacgatgctgcacagacgacgttatttacctgag
cttaccagtcgcaattttaatcaacgcagcttcgcagaacgaacagcgatgaatacccct
attcaaggaagcgctgctgatattataaaaaaagcgatggttgatatggctgtgaaaatg
gaagaacaaaccatgaattcgcgccttcttctacaagtccacgatgaacttatttttgaa
gtgccagaagaagaattagagcaaatgacgaagcttgtacctgacgttatggaaaaagcg
gttgagctggatgtcccattaatagcagatgtagcatacggtgatacttggtacgatgcg
aaataa
DBGET
integrated database retrieval system
