KEGG   Salipaludibacillus sp. LMS25: MM221_03015
Entry
MM221_03015       CDS       T08296                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
slms  Salipaludibacillus sp. LMS25
Pathway
slms03030  DNA replication
slms03410  Base excision repair
slms03420  Nucleotide excision repair
slms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MM221_03015 (polA)
   03410 Base excision repair
    MM221_03015 (polA)
   03420 Nucleotide excision repair
    MM221_03015 (polA)
   03440 Homologous recombination
    MM221_03015 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slms03032]
    MM221_03015 (polA)
   03400 DNA repair and recombination proteins [BR:slms03400]
    MM221_03015 (polA)
Enzymes [BR:slms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MM221_03015 (polA)
DNA replication proteins [BR:slms03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MM221_03015 (polA)
DNA repair and recombination proteins [BR:slms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MM221_03015 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MM221_03015 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 MIER1_3_C HHH_2 Imm64 CjCas9_WED-like
Other DBs
NCBI-ProteinID: UTR15576
LinkDB
Position
complement(635514..638159)
AA seq 881 aa
MLNVEKLVLVDGNSIAYRAFFALPLLNNEKGVYTNAVYGFTTMILKILEDEQPTHMLVAF
DAGKTTFRHDTFKEYKGKREKTPPELAEQLPVMRDLLNAFNIRYYEVDNYEADDIIGTLA
TKAVNDQQQWKVKIYTGDKDLLQLVSPNVHVALTRKGITNVDTYDLQMVDDTYGITPKQI
VDMKGLMGDSSDNIPGVPGVGEKTALKLLKEYKTIEGVYKALDKVSGKKLKENLEQNKEQ
AFMSKKLAEIMLEAPVNVSLDQLKLGEKENDKLISLFKELEFNSLLDRLGMEETLSDLEE
LEHLDVQRVNHVTEDILQSPSAIVVEVLEENYHQAEIIGLAIANETGTYYLSADVVLKSD
VFKNWAADATRQKYIFNAKRAVVALGWQDVVMNGIIFDVQIASYLINPSASSHDIADIAK
RQKILKVQSDEAIYGKGKKRHIPEVDLLSQHLGRKAAAVLELKDDLQGELEENDQLDLFE
KLEMPLSVILGRMEMNGVAVNEDVLRKMGEDLTHRLEKIEKDIHKLAGTEFNINSPKQLG
EVLFEKLNLPVIKKTKTGYSTSADVLEKLQDAHEVIPLILHYRQLGKLNSTYIEGLLKVL
HKKTGKIHTIFNQAITQTGRLSSTEPNLQNIPIRLEEGRKIRHAFVPEHKHARILAADYS
QIELRVLAHISQDANLKQAFNDNMDVHTKTAMDVFGVAHTDVTDNMRRTAKAVNFGIVYG
ISDYGLSQNLGITRKEARTFIDKYFESYPGVKDYMDTIVEEARANGFVTTMLHRRRYLPE
LTSRNFNQRSFAERTAMNTPIQGSAADIIKKAMVDMAVKMEEQTMNSRLLLQVHDELIFE
VPEEELEQMTKLVPDVMEKAVELDVPLIADVAYGDTWYDAK
NT seq 2646 nt   +upstreamnt  +downstreamnt
gtgttaaatgtggaaaaactcgtcttagtagacggaaatagtattgcatatcgcgctttc
tttgcattgccacttttaaataatgaaaaaggtgtatacacaaatgccgtatacggcttt
acaacgatgattctaaaaatattagaagacgaacaaccgacacacatgcttgtagcattt
gatgcaggtaaaacaacgtttagacatgacacgtttaaagaatacaaagggaaacgtgag
aagactcccccagaattagctgagcaattacctgttatgagagatttactaaatgccttt
aacattcgctactatgaagtagataattatgaagccgatgatattattgggacgcttgct
acaaaagctgtcaacgaccaacaacagtggaaggttaaaatttatacaggtgataaagat
ttacttcaactcgtatctccaaacgttcacgtagcgttgacacgcaaaggtattacaaat
gtagatacgtacgatttacaaatggtcgacgatacatacggcatcacgcctaaacaaatt
gttgacatgaaaggattaatgggagatagctccgataatatccctggagtgccgggtgtt
ggggaaaaaacagccttgaaactacttaaagagtataagaccattgaaggtgtttataag
gcacttgataaagtaagtggcaaaaaactaaaagagaatctcgaacaaaataaagaacaa
gcatttatgagtaaaaagcttgcggaaattatgcttgaagcaccagtaaatgtctcacta
gatcagttaaagttaggtgaaaaggagaatgacaagttaatcagcttgtttaaagaacta
gaatttaactctctccttgatcggctaggtatggaagaaactctttctgacttagaggag
ctagaacatctggacgtacaacgtgttaatcacgtgactgaagacatactacaatcgccc
tctgcaattgtcgttgaagtattagaggaaaattatcaccaagctgagattatcggctta
gcgattgccaatgaaacagggacatattacttatcggcagatgtggtcctaaaaagtgac
gtgtttaaaaactgggcagctgatgccacaagacagaagtatatttttaatgctaaaaga
gcggttgtcgctctcggatggcaggatgtggtgatgaatggtattatctttgacgtgcag
atagcttcttatttaattaatccatctgccagctcgcatgatatagccgatatcgctaaa
cggcagaaaatccttaaagtccagtcagatgaagcgatatatggaaagggaaagaagcgc
catattcctgaagtggatctcttatctcaacatttaggacgtaaagcagctgccgtgctt
gagttaaaagatgacttacaaggtgaactggaggagaacgaccagctagacctattcgaa
aaacttgaaatgccgttatccgtcattcttggaagaatggaaatgaatggcgtggcagta
aatgaagatgtcctaaggaaaatgggagaagacttaacacatcgtcttgaaaagatagaa
aaagacattcacaaacttgcaggcacggaatttaatattaattctcctaaacagcttggt
gaagtcttattcgaaaaactaaacttacctgttattaaaaaaacgaaaacaggctactcc
acttcagctgatgtactagaaaagttacaagatgctcatgaggtgatcccattaatattg
cactatcgccaattaggaaagctcaattcaacttacattgaaggtctattaaaagtactg
cataaaaagacaggaaaaattcatacgatttttaatcaagcgatcacccaaacgggaaga
ctgagctcaactgaacctaacttgcaaaatatcccaatacgccttgaagaaggacggaaa
atacgccatgcctttgtaccagaacataaacatgcacgaattttagctgctgattactcg
caaattgagctgcgtgtactcgctcacatctcacaagatgctaatttaaagcaagcattc
aatgataatatggacgtgcatacgaaaacagcgatggatgttttcggtgttgcccatact
gacgtgacggacaatatgagacgaacagcgaaggcagtcaactttggcatcgtttatggt
attagtgattacggtttgtcacaaaacttaggtatcacaaggaaagaggcgcgaaccttt
atagataaatattttgaaagttatcctggcgtcaaagactatatggacacgatcgtggaa
gaagcgagagcaaatggatttgtcacaacgatgctgcacagacgacgttatttacctgag
cttaccagtcgcaattttaatcaacgcagcttcgcagaacgaacagcgatgaatacccct
attcaaggaagcgctgctgatattataaaaaaagcgatggttgatatggctgtgaaaatg
gaagaacaaaccatgaattcgcgccttcttctacaagtccacgatgaacttatttttgaa
gtgccagaagaagaattagagcaaatgacgaagcttgtacctgacgttatggaaaaagcg
gttgagctggatgtcccattaatagcagatgtagcatacggtgatacttggtacgatgcg
aaataa

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