Salipaludibacillus sp. LMS25: MM221_07185
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Entry
MM221_07185 CDS
T08296
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MM221_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slms03400
]
MM221_07185
DNA repair and recombination proteins [BR:
slms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MM221_07185
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Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
UTR16323
LinkDB
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Position
complement(1557337..1558182)
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AA seq
281 aa
AA seq
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MHTMWKGTISFGLVNIPVKLHAATENKDIKLRQLHKECHTPISYEKVCSSCEKEVANEDI
VKAYEYEKNKFVVLDDDDLESLRKESEGKAVEIIDFVKLEEIDPIYFDRSYFLAPDTGGG
KAYVLLRQSLEESGKIGVAKITIRSKEQLAIVRVYENTLVMETIHFPDEVRHAGEVAIPD
NQTITKKELDTALMLIKQLTTPFDPEKYQDDYRNALLDVIEQKRAGEKTVETTGKPAPAA
SNVTDLMSALQASIDKNKKKTGKQGTKKKASSQTSVKKKAQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaaaggaacgatcagctttggcttagtcaatattccagttaagctt
cacgctgcaacagaaaataaagacatcaaattaaggcagcttcataaagagtgccacacg
ccaatttcgtatgaaaaggtatgtagcagctgtgaaaaagaagtagcaaacgaggatatc
gtcaaagcatatgaatatgagaaaaataaatttgttgttcttgatgatgatgatttagaa
agcttacggaaagaaagtgaaggcaaagcggttgagattatcgatttcgttaaattggaa
gaaattgatcctatttattttgacagaagttatttccttgctcccgatactggcggagga
aaggcgtacgtgttattaaggcaatcattagaagaatcaggaaaaataggtgtagccaaa
attacgatccgttcgaaagagcaattggctatcgttcgtgtttatgaaaacacattggtg
atggaaacgatccattttcctgatgaagtccgacatgctggggaggtcgcgattcctgat
aatcaaactattacaaaaaaagaattggatacggcgctcatgttaattaagcaactgacg
accccatttgacccggaaaagtatcaagatgactatcgtaatgccttactggatgtaatc
gaacagaaacgggcaggagaaaagacggtggaaacgactggaaagccagcgccggcagcg
tccaatgtcacagacctcatgtccgcattacaggcatctattgataaaaacaaaaagaaa
acaggaaagcaaggaacaaagaagaaagcaagttcgcaaacaagcgtgaagaaaaaagct
caataa
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