Salipaludibacillus sp. LMS25: MM221_12260
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Entry
MM221_12260 CDS
T08296
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
slms
Salipaludibacillus sp. LMS25
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slms03021
]
MM221_12260 (sigB)
Transcription machinery [BR:
slms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MM221_12260 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
IF2_N
Sigma70_ECF
HTH_3
TnsD
DUF1492
NirdL-like_HTH
UPF0122
KORA
DUF134
HTH_37
PhyR_sigma-like
SieB
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
UTR13414
LinkDB
All DBs
Position
2641966..2642775
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AA seq
269 aa
AA seq
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MDMASRKKSRNSNKSQNQSKEKVLKWIEEFQRTGDDELQTKLVKEFENLVQSLARKFSKG
QRHDEDLVQVGMIGLLAALRRFDPEFGRSFESFAVPTIVGEIKRFIRDKTWSVHVPRRIK
ELGPKIKSAVEELTTELQRSPKVEEIAEHLNVSEEEVLETMEMGKSYQALSVDRSIEADD
EGSAVTLLDLVGQSEDGYEKTDQQLLLEKAFAVLTEREKQILQLTYFENLSQKETGDELG
ISQMHVSRLQRRALQKLRESIRIEPTECL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgtctcggaagaagtcccggaacagcaataagtcacaaaatcaaagcaaa
gaaaaagtccttaaatggattgaggaatttcaacggacaggtgacgacgagttacaaaca
aaactcgttaaagaattcgaaaatcttgttcaatcattagctagaaagttttctaaaggc
caacgccacgatgaagatttagttcaagtagggatgatcggtttactcgctgctttaagg
cgatttgaccctgaatttggacgtagttttgaatcctttgctgtccccacaattgtaggt
gaaattaaacgttttattcgtgataaaacttggagtgtccacgtcccaaggcggattaag
gagttaggtccgaaaattaaaagtgccgttgaagagttgacaacggaactgcaacgttcc
cctaaagtggaggaaatcgcagagcacttgaacgtctctgaagaagaagtacttgaaaca
atggaaatgggaaagagttatcaggctctatctgttgatagatccattgaagctgatgat
gaaggtagcgcagtgaccttattagacctcgttggtcaaagtgaagatgggtatgaaaaa
acagatcaacagcttttattagaaaaagctttcgcagtgttgacagaaagagaaaagcaa
attctgcagcttacctacttcgagaaccttagccaaaaagaaacgggggatgaattaggt
atctctcaaatgcatgtgtctagattgcagagaagagctttgcaaaaattaagagaatcc
attcgcattgaacctacggagtgcttataa
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