Salipaludibacillus sp. LMS25: MM221_17195
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Entry
MM221_17195 CDS
T08296
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MM221_17195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slms03400
]
MM221_17195
Enzymes [BR:
slms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MM221_17195
DNA repair and recombination proteins [BR:
slms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM221_17195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_28
AAA_22
HTH_IclR
Rad17
Zeta_toxin
TsaE
HHH
nSTAND3
T2SSE
NTPase_1
NPHP3_N
AAA_18
ArsA_ATPase
RecR_HhH
AAA_17
AAA_16
AAA_29
AAA
Motif
Other DBs
NCBI-ProteinID:
UTR14278
LinkDB
All DBs
Position
3686932..3689247
Genome browser
AA seq
771 aa
AA seq
DB search
MNHINEGHEDYIKGELLHLIFHNEESLYTVAKVRVNDASQKLVEKEMTVVGMMTEPEQEV
MYEFKGAVSEHPRFGRQFKFVQFKKVMPETEQGIILYLSSDRFPGIGRKTAQVIVEHLGV
TCISKILENPSVLDEIRKLAKDKAQHVYKTLLEDQGIEQILLKLYEFGFGVQLAMKVYKA
YQTEALEIIQKNPYRMVEDVEGIGFGRADLIGRKQGIIGNHPDRLKAAIHYVLHDESLSA
GHVYSKNETIVKEAKKLLEKDTYDDISPLDIANEVIALGEEGKIVVEGDKMFLPSLYFAE
QGIVTNLRRLMASEADLDEFPESEFLKALGKVEELLGITYASSQKEGIQQALQSPMLILT
GGPGTGKTTVIKGLVEVFGMLKGISIEPEDYKRKKEPFPILMAAPTGRAAKRMSESTGLP
ASTIHRLLGYKGEDSTWFEKGEEEKLEGKIIIVDEMSMVDTWLANQLLRAIPDGMQVIFV
GDEDQLPSVGPGQVLADLLTSGRIPAVRLTDIYRQSEGSKIIEFSHQIKEGALPPSIDRS
SNDLRFFPCEQPEVPNAVKQICERAIDKGFSARDIQVLAPMYRGVAGVENLNDMLQTLFN
PKSDKKKEIPFGDVVYRIGDMVLQLVNNPEENVFNGDRGEIIAIKTEKEAGEKQTEIIIS
FDGEEVSYTRPDLTQITHAYCCSIHKSQGSEFPIVIMPVVRGYYRMLRKKLIYTGVTRAK
HFLLLCGSWESLQLAVETNTEESRQTTLKEKLTESPLEIEYTNESKGTMKD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacataaatgaaggtcatgaggattatattaaaggtgaacttcttcatctgatt
tttcataatgaggagtctctttatacagtagcaaaggtaagagttaatgatgcgtcacag
aaactggtcgaaaaagagatgacagtagtgggcatgatgacggagccagaacaagaagtc
atgtacgagtttaaaggtgctgtctcagaacacccacgatttgggcgacaattcaagttt
gtacagtttaaaaaagtgatgccagaaacagagcaagggatcattttatatttatctagc
gaccgttttccaggaatcggtcgtaaaacagctcaagtgatcgtagagcatttaggtgtg
acgtgtatttcaaaaattttagagaacccatctgtattagatgaaatacgtaagctagca
aaagataaagcacagcatgtgtataaaacactgttagaagaccaagggattgagcagatc
ttacttaagctatatgagtttggcttcggagttcaactagctatgaaagtttataaagca
tatcagaccgaagctttagaaatcatacaaaaaaacccgtaccgtatggttgaagatgta
gaaggaattgggtttgggcgtgctgacttaataggcagaaaacaagggattatcggtaat
caccctgatcggctaaaagcggctatccactacgttcttcatgacgaatctctaagtgcc
ggtcatgtttattccaaaaatgaaacgattgtgaaagaagcaaagaagctcttagaaaaa
gatacatatgacgatatctctcccttagatattgccaatgaagtgattgccctcggtgaa
gaaggaaaaatagttgttgaaggggacaaaatgtttctcccatcgttgtattttgcagag
caaggtattgtcactaatttgcggcgacttatggcgtctgaagctgatttagatgaattt
ccagaatcagagtttttaaaagcgttaggtaaagtggaagaactccttggcattacttat
gcttcttctcaaaaagaaggaatccagcaagcgttacagtcgccaatgctaatattaacc
ggtgggcctggcactggtaaaacgaccgttattaaaggattagttgaagtgttcggcatg
cttaaaggcatatcaatagagccggaagattataaaagaaaaaaagaaccttttcctatt
ctgatggcagcccctaccggacgagccgctaaacgtatgagtgaatcgacgggattacct
gcctctactattcaccgtctgcttggttataaaggagaagacagtacatggtttgaaaaa
ggtgaggaagagaagttagaaggaaaaataatcatcgtagatgaaatgtcaatggtggat
acatggcttgcaaatcagttgttaagagccattccagacggtatgcaagtgatttttgtg
ggtgatgaagatcaactgccttctgttggtccagggcaagtattagcagatctccttaca
tctggacgcataccagctgttcggctgacagatatttatcgccagtcagaaggctctaaa
attattgaattttcccatcaaattaaagaaggggccttacctccctctatagaccgctca
agtaatgatttacgctttttcccatgtgaacaaccagaagttcctaatgcggttaaacaa
atttgtgagcgggctattgataaaggcttttctgctagagatattcaagtgctagcacct
atgtatcgtggtgtggccggggtggaaaatttaaatgatatgctacaaactttattcaat
cctaagtcagacaaaaaaaaggaaatcccattcggggatgttgtgtatcgaattggggat
atggtgttacagctagttaataacccagaagagaatgtatttaatggagatagaggcgaa
attatcgccattaaaacggaaaaagaagccggtgagaagcaaacagaaattataatttct
tttgatggtgaagaggttagttatacgcgtcctgacttaacacaaataacgcatgcctat
tgctgttcgattcacaaatcacaagggagtgaattcccaattgttatcatgcctgttgtt
cgaggctattatcggatgcttagaaaaaaattaatttatacgggtgtgacacgggctaaa
cattttctgcttctttgtggaagttgggagtctttgcagctagctgtggaaacaaataca
gaagaaagtagacagacgacattaaaagaaaaattgactgaatcaccattggaaattgaa
tacacgaatgaatcaaaggggacgatgaaagactaa
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