Salipaludibacillus sp. LMS25: MM221_17585
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Entry
MM221_17585 CDS
T08296
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms03030
DNA replication
slms03430
Mismatch repair
slms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM221_17585 (holA)
03430 Mismatch repair
MM221_17585 (holA)
03440 Homologous recombination
MM221_17585 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slms03032
]
MM221_17585 (holA)
03400 DNA repair and recombination proteins [BR:
slms03400
]
MM221_17585 (holA)
Enzymes [BR:
slms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM221_17585 (holA)
DNA replication proteins [BR:
slms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MM221_17585 (holA)
DNA repair and recombination proteins [BR:
slms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MM221_17585 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
UTR14355
LinkDB
All DBs
Position
3760809..3761843
Genome browser
AA seq
344 aa
AA seq
DB search
MSYVDVLKEINKGNLSPLYLLYGSETYLIEDILQRIISATLSREEQEFNLSKFDMQEHAV
EIAIEEAYTYPFMGGKRVVIVKNAYFLSGQQTKEKVEHDIKKLQLYIDKPSLETIFILIA
PYEKLDERKKLVKSLKKQGVIMEGKPLEEKDLRHWIGNRSEEFGVTFDSEAQGALLALTG
ANLMIMASEVKKLALHVGEGATVQQHHVESLVARSLEQDIFALVDNVVKSNVPRALKIYK
DLLKQKEAPLKIVALMVRQFRILYQVKQLVSQGYGEKMIASQLKLHPYVVKLAGRQVKKF
DDSQLLMLIDQLAELDYRIKTGQVHDELGVELFLLKRQPSNLSV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgtggatgtattaaaagaaattaataaaggaaatctttccccgctttattta
ttatacggttctgaaacctatctcattgaagatattttgcaacggattatttctgccacc
ctctcacgtgaggaacaggaatttaatttatctaaatttgatatgcaggaacatgcggta
gaaatagctatagaagaagcctatacttacccgtttatgggtggaaaacgggttgtgatt
gtcaaaaatgcttactttttgtcgggacagcaaacgaaagaaaaagtggaacatgatatt
aaaaagttacaattatacattgataaaccttctctggaaacaatttttattcttattgct
ccttatgaaaagttagacgaaagaaaaaaactcgtcaaatcgcttaagaagcaaggggtg
atcatggaagggaagcctttagaagaaaaggacttacgtcattggattggaaataggagt
gaagagtttggtgtgacattcgattcagaggctcaaggagcacttcttgctttaactggt
gccaatttaatgattatggcatccgaagtaaaaaaattagcgcttcacgtgggggaaggg
gcaactgttcaacaacatcatgtggaaagtcttgtggctagatctcttgaacaagacatt
tttgcactcgttgataacgtcgtaaagtcaaatgtgccacgcgctcttaaaatatataaa
gatttattaaaacaaaaggaagcccctttaaaaatagtagcacttatggtgcgacaattt
cgtattttatatcaagttaaacagcttgttagccaaggttatggagaaaaaatgattgct
tcccaattgaaattacacccgtatgttgttaaattagctgggagacaagttaagaaattt
gatgatagccaattactaatgctcattgatcaactcgctgaacttgattatcggattaaa
acagggcaagtgcacgatgaattaggggtagaactctttttacttaaaagacaaccgagt
aatctatccgtataa
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