Salipaludibacillus sp. LMS25: MM221_17815
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Entry
MM221_17815 CDS
T08296
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
slms
Salipaludibacillus sp. LMS25
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slms03019
]
MM221_17815
03009 Ribosome biogenesis [BR:
slms03009
]
MM221_17815
Enzymes [BR:
slms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MM221_17815
Messenger RNA biogenesis [BR:
slms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MM221_17815
Ribosome biogenesis [BR:
slms03009
]
Prokaryotic type
rRNA helicases
MM221_17815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
PhoH
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTR14396
LinkDB
All DBs
Position
3807626..3808924
Genome browser
AA seq
432 aa
AA seq
DB search
MTHNFERFNLKPFLIEALKDNNITLPTEIQERLIPSIKNGHDVIGRSQTGTGKTLAFLLP
LLDKIEEEKKATQLVITAPTRELAIQLYEVAKHYIEASPEVITSQLVVGGTDRLRMIEKA
QQQPHLVIGTPGRILDMLKERAIKTDSVKSFVVDEADQMLDMGFLEDVDEIATRMNEDLQ
LLVFSATIPEKLKPFLKKYMKNPKQVEVEIKVASPKKIRHWLLNDRDRDRLELIKKVTAS
LQPYLAIIFTNTKESADDVFESLRNEGLNVDCLHGGMPPRHRKKVLKKLQEAEIQYLVAT
DLIARGIDIKGITHIINYELPRELEYYVHRAGRTARAGWEGITITLYGRNDQISLEKLEK
QGIHFEYKDIKQGEWVSIEKRQYSPRQPKSHGPGVLKGIKKSKKVKPGYKKKIKKQIESK
MKREKRINRRKG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgacacataattttgaacgatttaacttgaaaccatttctaattgaagcattaaaagac
aataacattaccttacccactgaaatacaggaaagacttattccttctatcaaaaacggt
catgatgtcatcggccgatcgcaaacggggaccggaaaaaccttggcgtttttactgccg
ttattagataagatagaagaggagaaaaaggcaacacaattagttattacggcacctacg
agggaattagcgattcaattgtatgaagtagctaagcactatattgaagccagtccggaa
gtgattacttctcaattagttgtgggtggaactgacagacttcggatgattgagaaggct
caacagcagccacatctagttattggtacacctggtcgaatattagatatgctaaaggaa
cgtgctattaaaacagatagcgttaaaagctttgtcgttgatgaagctgatcagatgctt
gatatgggtttcttagaagatgtggatgagattgctacaaggatgaatgaagatttacag
ctccttgtattttctgcaaccattccagagaagctaaagccgtttcttaaaaagtatatg
aaaaacccgaagcaagtagaagtagaaattaaggttgcttcaccgaaaaaaataaggcat
tggctcctaaatgatcgcgacagagacagacttgaacttattaaaaaagtgacagcatcc
cttcaaccttatttagccatcatttttacaaatacgaaagagtccgctgatgacgtattt
gaaagtctgaggaacgaaggattaaatgttgattgcctgcatggcggtatgcctccgcgt
catcggaaaaaagtcttaaaaaaacttcaagaagcggagattcaatatttagtggctacc
gatttaattgcccgaggaatcgacataaaagggattacccatatcattaactatgaacta
cctagagaactagagtattacgtacacagggcaggtagaacagctcgtgctggctgggaa
ggtattacaattacattatacggtcgaaacgatcaaataagtctcgaaaaattagagaaa
caaggtattcactttgagtataaagacatcaagcaaggcgaatgggtatccattgaaaaa
cgacagtactcacctcgccaaccaaagtcgcatggacctggcgtgttaaaaggtataaag
aaatcaaaaaaagtaaagccaggttataagaaaaaaataaaaaaacaaatagagagtaag
atgaaacgggagaagagaataaaccgacgtaaaggatag
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