KEGG   Salipaludibacillus sp. LMS25: MM221_17815
Entry
MM221_17815       CDS       T08296                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
slms  Salipaludibacillus sp. LMS25
Brite
KEGG Orthology (KO) [BR:slms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slms03019]
    MM221_17815
   03009 Ribosome biogenesis [BR:slms03009]
    MM221_17815
Enzymes [BR:slms01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MM221_17815
Messenger RNA biogenesis [BR:slms03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MM221_17815
Ribosome biogenesis [BR:slms03009]
 Prokaryotic type
  rRNA helicases
   MM221_17815
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 PhoH Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: UTR14396
LinkDB
Position
3807626..3808924
AA seq 432 aa
MTHNFERFNLKPFLIEALKDNNITLPTEIQERLIPSIKNGHDVIGRSQTGTGKTLAFLLP
LLDKIEEEKKATQLVITAPTRELAIQLYEVAKHYIEASPEVITSQLVVGGTDRLRMIEKA
QQQPHLVIGTPGRILDMLKERAIKTDSVKSFVVDEADQMLDMGFLEDVDEIATRMNEDLQ
LLVFSATIPEKLKPFLKKYMKNPKQVEVEIKVASPKKIRHWLLNDRDRDRLELIKKVTAS
LQPYLAIIFTNTKESADDVFESLRNEGLNVDCLHGGMPPRHRKKVLKKLQEAEIQYLVAT
DLIARGIDIKGITHIINYELPRELEYYVHRAGRTARAGWEGITITLYGRNDQISLEKLEK
QGIHFEYKDIKQGEWVSIEKRQYSPRQPKSHGPGVLKGIKKSKKVKPGYKKKIKKQIESK
MKREKRINRRKG
NT seq 1299 nt   +upstreamnt  +downstreamnt
gtgacacataattttgaacgatttaacttgaaaccatttctaattgaagcattaaaagac
aataacattaccttacccactgaaatacaggaaagacttattccttctatcaaaaacggt
catgatgtcatcggccgatcgcaaacggggaccggaaaaaccttggcgtttttactgccg
ttattagataagatagaagaggagaaaaaggcaacacaattagttattacggcacctacg
agggaattagcgattcaattgtatgaagtagctaagcactatattgaagccagtccggaa
gtgattacttctcaattagttgtgggtggaactgacagacttcggatgattgagaaggct
caacagcagccacatctagttattggtacacctggtcgaatattagatatgctaaaggaa
cgtgctattaaaacagatagcgttaaaagctttgtcgttgatgaagctgatcagatgctt
gatatgggtttcttagaagatgtggatgagattgctacaaggatgaatgaagatttacag
ctccttgtattttctgcaaccattccagagaagctaaagccgtttcttaaaaagtatatg
aaaaacccgaagcaagtagaagtagaaattaaggttgcttcaccgaaaaaaataaggcat
tggctcctaaatgatcgcgacagagacagacttgaacttattaaaaaagtgacagcatcc
cttcaaccttatttagccatcatttttacaaatacgaaagagtccgctgatgacgtattt
gaaagtctgaggaacgaaggattaaatgttgattgcctgcatggcggtatgcctccgcgt
catcggaaaaaagtcttaaaaaaacttcaagaagcggagattcaatatttagtggctacc
gatttaattgcccgaggaatcgacataaaagggattacccatatcattaactatgaacta
cctagagaactagagtattacgtacacagggcaggtagaacagctcgtgctggctgggaa
ggtattacaattacattatacggtcgaaacgatcaaataagtctcgaaaaattagagaaa
caaggtattcactttgagtataaagacatcaagcaaggcgaatgggtatccattgaaaaa
cgacagtactcacctcgccaaccaaagtcgcatggacctggcgtgttaaaaggtataaag
aaatcaaaaaaagtaaagccaggttataagaaaaaaataaaaaaacaaatagagagtaag
atgaaacgggagaagagaataaaccgacgtaaaggatag

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