KEGG   Staphylococcus lugdunensis N920143: SLUG_03490
Entry
SLUG_03490        CDS       T01951                                 
Symbol
slsD
Name
(GenBank) putative LPXTG cell wall-anchored protein (pseudogene)
  KO
K14194  serine-aspartate repeat-containing protein C/D/E
Organism
sln  Staphylococcus lugdunensis N920143
SSDB
Motif
Pfam: SdrD_B Big_8 CarboxypepD_reg SdrG_C_C SpaA YSIRK_signal CarbopepD_reg_2 Collagen EMC7_beta-sandw Ig_DR_A0283-like CFSR bMG3 Gram_pos_anchor MetallophosN NOMO1-like_1st NOMO1-like_2nd Y_Y_Y NusG_II
Other DBs
NCBI-ProteinID: CCB52766
LinkDB
Position
join(374666..378073,378077..379528)
AA seq 1619 aa
MTNRKRNSSQRMDFIPNKLNKYSIRKFTVGTASILVGATLFLGHHEAEAAEKQQSISQNH
SDEQESSQADTTVTTEQTTNNNVSSQTNATSPSTQDKTTIDHTENPSSTNQQITENQSLH
AKDLQTSNQNNVSHKDTANKSTEKEARQHQNHKSTIQQQESSEKLVTAAQNASATNQAVS
TNTNETHVQYADKKLSQIGVNHQTKEQVKASLVTKKAFKPRSKRDLDNTIVAEALKADIT
NPDYGVRTPATPVTAAASTSPTTRALSSNYRVRALAAATPTGKDVSDKIKFSNIDIAVEG
RTAHTNASGQRELWVTSGDILSLKADYTVDNSVKSGDTFTIGYGQYIRPGGFSLPSSDTE
LRDANGAIIAKGKYDSNTNKTTYTFTNYVDQYDNIQGSFKIAATAKRENAINDKGSYNMD
VKIGNVSFNKNIIVDYGDNKNNPLNASTLYRDPKTNQQYRIIYINEPGKTYKNVKYHSTT
MNGKLIDGTDAIKVYKVNDPSAMVNSFAPDLTSSKVTDVTSSKTITYDNNRSTVNVSLGN
LDGKTRYIIAEKVEPTTDNGNLSSTFSITNDDKNNPTIWAASTTQGSAGDNSTGSGQQTG
KYSLGDIVWNDKNRNGIQDIGEEGIPNVYVTLKDANGNEIDRVTTDENGNYKFKNLKNGE
YTLEYSTPNGGYSLTKADQSNNDAVDSDAQLVNGKYVAKATIQDDDNMTVDAGFYKSVYN
IGDFVWNDTNKNGIQDDGEKGLAGVTVLLKDEQGRTIATTVTDKNGKYGFYELESGNYTV
QFITPDGYILSPSKVGTDVTKDSNGDEVPIKLTENDYSNDLGLYKPDAPKLDDYEITVED
KSYENTVRVNTKLPKNTIQLAQQGKDGRDRVYYKQLGYHPDLTGKDASKLLQIDGYYFEE
VRRDHIYQSQDAIFEYNLDNNTGVKNITYNPTTNTYTVTYQDGSTKELPGQQPKGLTINN
SYINQNGDTIVEFSDGTTITIPKGKDGVDGKKGEDGKTPKIEQTPITDSSGKQIGVTITV
KDGDGKVINTQKVLNGQDGAKGNPGEKGEKGDPGTKGDKGEKGDTGAAGRDGQNGQDGKS
VIANTERGTKDGQEGAYIRIYEVNPDGSRGTMISETFIKDGVKGQDGKDGRSPSIQTPIK
DEKGKIIGTTITILSPDGQEVSHQDILNGKDGQNGTSVTTITERGRQNDQTGSYVRTYER
NPDGSRGKLISETFISDGQNGKDGQNGMNGKSITAETRPGTDADGNTGAWIRVYELNPDG
TKGQLISETFIKNGAKGEKGEDGKTPKIEQTPIRDSSGNQIGVTITVTDGDGNVVSKENI
LNGKDGAKGENGKTPSVEQQAIQDKDGKQIGVTIIIKDGDGKEISRQNILNGQDGKNGTP
GKDGQTPTVETMPALDKDGKQIGVTIITRDGNGKEVSRQNIYNTSNITNIYVNVEGNIVF
VFKDGTTCICKCEPNKPNEPGKPSEPGKPNEPNKPSEPSKPSEPNKPSEPSKPSEPGKPS
EPNKPNEPSKPSEPNKPNEPSKPSEPTKPSEPNKPSEPGKPSKPNKSVHTRTMKHVNYKT
TSHLQQVHDTTQSNNDKKQQELPATGAVDDNGYQAPFFGSLFAISGTILFLARRRKHHQ
NT seq 4860 nt   +upstreamnt  +downstreamnt
atgactaacagaaagagaaactcgtcacaacgcatggattttatcccaaacaaactaaac
aaatattcaatcagaaaatttacagtaggtacagcttcaatattagtaggtgccacactt
ttcttagggcatcatgaagctgaagcagctgaaaaacaacaatccatatctcaaaaccat
agcgatgaacaagaaagttctcaagctgatacaacagtaaccacagaacaaacaacaaat
aataatgtttcttctcaaactaacgccacgtcaccaagcactcaagataaaacaacgata
gatcacactgaaaatccatcttcaacaaaccagcagataacagaaaatcaatcactgcat
gcaaaagatttacaaacatcaaatcaaaacaatgtctcgcataaagatactgcaaacaaa
tcaacagaaaaagaagctagacaacatcaaaatcataaatcgacaattcaacaacaagaa
agttcagaaaagttagtaacagctgctcaaaatgcatcagctacaaaccaagctgtatcc
accaatacgaatgagacacatgtacaatatgctgataaaaaattgagccaaattggcgtg
aaccatcaaacgaaagaacaagttaaagcttcactagttactaagaaagcttttaagcca
cgttctaaacgagatttagataatacaattgtggcagaagccttaaaagcagacattaca
aaccctgactatggtgttagaacccctgcaactcctgtaactgcagctgcttcaacatct
ccaacaacgcgtgcattgagtagtaattatagagtaagagcattagcggcagctacacca
acaggtaaagatgtgagtgacaaaattaaattttcaaatatagatatagcagtggaaggt
agaactgcacatacaaatgctagtggtcaacgtgaattatgggtgacttctggagatatt
ttatctttaaaagcagattataccgttgacaatagcgttaaaagtggagatacatttacg
ataggctatggacaatatattagacctggaggattttcgttaccatcatcggacacagaa
ttaagagatgcaaatggtgcaattatagctaaaggtaaatatgatagtaacacgaataaa
acaacctacacgtttacaaattacgttgaccaatatgataatattcagggatcttttaaa
atagctgcaactgctaaacgagagaatgccatcaatgataaaggatcatataatatggac
gtaaaaattggaaatgtttctttcaataaaaatattattgttgattatggtgataataag
aataaccctttaaatgcatcaacgctttacagagatccaaaaacaaaccaacagtatcga
atcatttatattaatgagccaggcaaaacatataaaaatgtgaaatatcatagtacaaca
atgaatggaaaactcatagatggcacagatgcaataaaagtttataaagtgaatgatcct
tcagcaatggtcaacagtttcgcacccgatttaacttcaagtaaagtaacagatgttaca
tcatcaaaaacaattacatatgataataatcgctcaactgtaaatgtttctttaggaaat
ttagacggtaaaacacgttatattattgctgaaaaagtagaacctacaactgacaatggt
aacttaagttcaacgttttcaataactaacgatgataaaaataatccaacaatttgggca
gcaagtactacacaaggttctgctggagacaattcaactggtagtggtcaacaaacaggt
aaatattcacttggcgacattgtctggaatgacaaaaatcgaaatggcattcaagatata
ggagaagaaggcatacctaacgtttatgttactttaaaagatgctaacggaaatgaaatt
gacagagtgacaacggatgagaacggcaactataagtttaaaaatttaaaaaatggagag
tacactttagaatattcaactcctaatggaggatattcgttaaccaaagcagatcaaagt
aacaatgatgcagtcgactcagatgcacaattagtcaatggaaaatatgttgctaaagct
acaattcaagatgatgacaacatgacagttgatgccggattttataaatctgtttataac
atcggagacttcgtttggaatgatacgaataaaaacggcattcaagatgacggagaaaaa
ggacttgccggcgtaactgtattattgaaagatgaacagggacgtacaattgcaactact
gtaaccgacaaaaatggcaaatatggcttttacgaattagaatctggtaactatacagtt
caatttattacacctgatggttatatattatcaccatcaaaagtaggtacagatgtaact
aaagattctaatggcgatgaagtaccaattaaattaactgaaaatgattattctaatgat
ttaggtttatacaagccggatgcacctaaattagatgactatgaaattacagtagaagat
aaaagttatgaaaatactgttcgtgttaacactaagttacctaagaatacaatccaactt
gcacaacaaggtaaagatggtcgtgatcgtgtatattataaacaattaggctatcatcca
gatttgactgggaaagatgcttcaaaattactgcaaatagacggctattattttgaagaa
gtacgccgagatcatatataccaatcacaagatgctatttttgaatataacttggataat
aacacaggtgttaaaaatataacgtataatccaacaacaaatacgtataccgtgacatat
caagacggttcaacaaaggaactaccaggtcaacagcctaaaggattaacaataaataat
agttatattaatcaaaatggagatactattgtggaatttagtgatggtacaactattacg
attcctaaaggtaaagatggtgtcgacggtaaaaaaggtgaagatggtaaaacacctaaa
attgagcaaacaccaattaccgatagctcaggcaaacaaattggggttacaatcactgtt
aaagatggtgatggtaaagtaataaatacgcaaaaagtacttaatggtcaagatggagca
aaaggaaatccaggtgaaaaaggcgaaaaaggagacccaggaacgaagggtgacaagggc
gaaaaaggagatacaggcgctgcaggtcgagatggtcagaatggtcaagatggtaagtca
gtcattgcaaatacagaacgtggtacaaaagatggtcaagaaggcgcatatattagaatc
tatgaggtcaatccagatggtagtcgcggcacaatgatttctgaaacattcatcaaagat
ggtgtgaaaggccaagatggtaaagatggacgttcaccatcaatccaaacgcctataaaa
gatgaaaagggtaagattatcggaacgacgattactattctaagtccagatggtcaagaa
gtttcacatcaagatattttaaatggtaaagatggccaaaatggaacatctgtgacaacc
attacagaacgtggtagacaaaatgatcaaacaggttcatatgttagaacatatgaaaga
aatccagacggtagtcgtggcaagctcatcagtgaaacctttatctcagatggtcagaat
ggtaaggatggacaaaatggcatgaatggaaaatctataacagcggaaacacgtcctggt
acagatgctgatggaaacactggtgcatggattcgcgtttatgagttgaatcctgatggc
actaaaggccaacttatcagtgagacgtttattaaaaatggcgcaaaaggtgaaaaaggc
gaagacggtaagacaccaaaaatcgaacaaactccaatacgtgacagttctggtaaccaa
attggtgtaacaatcacggtaacagatggtgatgggaacgtcgttagtaaagagaatatt
ttaaatggcaaagacggtgcaaaaggtgaaaatggtaagacgccatctgtagaacaacaa
gccattcaagataaagatggaaagcaaatcggagtcacaattattatcaaagatggagac
ggtaaagaaatcagtcgtcaaaacattctaaatggccaagatggtaaaaatggtactcct
ggtaaggatggtcaaacaccaacagttgaaacaatgccagcattagataaagatggaaag
caaatcggtgtaactattattacacgcgatggtaatggcaaagaagtaagtcgtcaaaac
atatacaatacatctaatatcacaaatatttatgttaacgttgaaggcaacattgtcttt
gtcttcaaagatggaacaacttgtatttgtaaatgtgagccaaacaaaccgaatgagccc
ggcaagccaagcgaaccaggtaaaccaaatgaaccaaacaaaccgagtgagccaagcaag
ccaagcgagccaaacaagccaagtgagccaagcaagccaagcgaaccaggtaagccaagc
gagccaaacaaaccaaatgagccaagcaagccaagcgagccaaacaaaccaaatgagcca
agcaagccaagcgagccaaccaagccaagtgagccaaacaaaccgagcgaaccaggtaag
ccaagcaaaccgaacaaatcagttcatactagaacaatgaaacatgtgaactataaaaca
acgagtcatttacagcaagttcatgatacgacacaatcaaacaatgataaaaaacagcaa
gaattgccagcaacaggtgctgttgatgacaatggttatcaagctccattctttggatca
ttatttgcaatttcaggaacaatattgttcttagcaagacgtcgtaaacatcatcaataa

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